RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SPASTQ9UBP0 616 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 APEX2Q9UBZ4 518 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 BAIAP2Q9UQB8 552 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 GRIN2AQ12879 1464 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PDE2AO00408 941 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 EPN2O95208 641 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 LCP1P13796 627 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 LBPP18428 481 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 GLRBP48167 497 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 TNFAIP2Q03169 654 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 EPC2Q52LR7 807 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 C6orf52Q5T4I8 152 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 N4BP2L1Q5TBK1 243 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SCFD2Q8WU76 684 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SLC24A2Q9UI40 661 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 NDUFB5O43674 189 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 DDX5P17844 614 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 GTF2IP78347 998 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SH3D19Q5HYK7 790 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 EFHC2Q5JST6 749 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SLC9A4Q6AI14 798 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 DGKHQ86XP1 1220 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 CACTIN-AS1Q8N1I8 211 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SETD9Q8NE22 299 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 TSEN34Q9BSV6 310 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SP140LQ9H930 580 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SLC52A2Q9HAB3 445 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 AVENQ9NQS1 362 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 FANCAO15360 1455 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF12P17014 697 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SLC26A3P40879 764 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 RAB27AP51159 221 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 MPP3Q13368 585 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 FBXW8Q8N3Y1 598 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 AMER2Q8N7J2 671 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PTPRN2Q92932 1015 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 MNTQ99583 582 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PRRG3Q9BZD7 231 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 KIAA1586Q9HCI6 787 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 RAPGEFL1Q9UHV5 662 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 MATN2O00339 956 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CCNA2P20248 432 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 FAM47CQ5HY64 1035 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 GLRA4Q5JXX5 417 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SLC27A3Q5K4L6 730 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SCARA3Q6AZY7 606 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PARP8Q8N3A8 854 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ZSWIM2Q8NEG5 633 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 BPIFB6Q8NFQ5 453 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CKAP2Q8WWK9 683 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CYP4F12Q9HCS2 524 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 UMODL1Q5DID0 1318 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ADGRL3Q9HAR2 1447 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SLC26A4O43511 780 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 DCXO43602 365 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 HMGB2P26583 209 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 RRM2P31350 389 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CDK16Q00536 496 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 C2CD6Q53TS8 623 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 IL17REQ8NFR9 667 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TMED5Q9Y3A6 229 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PTPRQQ9UMZ3 2332 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 KANSL1LA0AUZ9 987 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SDR42E2A6NKP2 422 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 BIRC5O15392 142 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 KLRC1P26715 233 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TNFRSF8P28908 595 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SOAT1P35610 550 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 BTDP43251 543 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 EPS8Q12929 822 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 C15orf59Q2T9L4 293 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ZC2HC1CQ53FD0 456 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 GPATCH4Q5T3I0 446 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 RNF43Q68DV7 783 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CDRT15Q96T59 188 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TMEM260Q9NX78 707 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 MAPRE3Q9UPY8 281 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 GAS2O43903 313 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SHBGP04278 402 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 WARSP23381 471 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SCNN1DP51172 638 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 TCIRG1Q13488 830 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 KLHL24Q6TFL4 600 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CRTC3Q6UUV7 619 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 STOX1Q6ZVD7 989 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 RBM12BQ8IXT5 1001 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 ELOA2Q8IYF1 753 aaPredicted RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 KCTD4Q8WVF5 259 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PLEKHF1Q96S99 279 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 PDCD10Q9BUL8 212 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 LRMDAQ9H2I8 198 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CLK4Q9HAZ1 481 aaKnown RBP5.82□□□□□ -1.48
CSMD1-215ENST00000537824 AASDHPPTQ9NRN7 309 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 CMTM6Q9NX76 183 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 MYL12AP19105 171 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 NPTX2P47972 431 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SLC9A3P48764 834 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 SLC5A3P53794 718 aa5.82□□□□□ -1.48
CSMD1-215ENST00000537824 KHDRBS2Q5VWX1 349 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms