RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 KANSL3Q9P2N6 904 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 PSMD13Q9UNM6 376 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 FZD1Q9UP38 647 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 GOLGA8QA0A0J9YX86 632 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 GOLGA8OA6NCC3 632 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 GOLGA8NF8WBI6 632 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 GOLGA8RI6L899 631 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 RPA1P27694 616 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 PRDX6P30041 224 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 IFNA8P32881 189 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 ALDH18A1P54886 795 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 MESDQ14696 234 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 DCAF17Q5H9S7 520 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 IZUMO3Q5VZ72 239 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 ATG16L1Q676U5 607 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 AADACL2Q6P093 401 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 TMC5Q6UXY8 1006 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 GSTA5Q7RTV2 222 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 PCYOX1LQ8NBM8 494 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 ADCY4Q8NFM4 1077 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 RMND5BQ96G75 393 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 COQ7Q99807 217 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 MAN1C1Q9NR34 630 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 CRNNQ9UBG3 495 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 MOSPD1Q9UJG1 213 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 GTF3C4Q9UKN8 822 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 GRID1Q9ULK0 1009 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 IKBKGQ9Y6K9 419 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 RREB1Q92766 1687 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 TLR3O15455 904 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 SLC26A4O43511 780 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 KRT10P13645 584 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 USP41Q3LFD5 358 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 TKFCQ3LXA3 575 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 TIGD2Q4W5G0 525 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 SIGIRRQ6IA17 410 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 TWF2Q6IBS0 349 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 PPP4R3CPQ6ZMV5 832 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 NEK10Q6ZWH5 1172 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 NEK8Q86SG6 692 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 ALYREFQ86V81 257 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 HEATR4Q86WZ0 1026 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 C1orf54Q8WWF1 131 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 B3GNT3Q9Y2A9 372 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 HEMK1Q9Y5R4 338 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 LAMB4A4D0S4 1761 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 LRP5O75197 1615 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 CCNT2O60583 730 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 TTKP33981 857 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 BASP1P80723 227 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 PSMD6Q15008 389 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 PFKFB3Q16875 520 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 ELMSAN1Q6PJG2 1045 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 TTC30AQ86WT1 665 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 CD99L2Q8TCZ2 262 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 TTC17Q96AE7 1141 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 PRR11Q96HE9 360 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 ALG13Q9NP73 1137 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 SORCS3Q9UPU3 1222 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 GNEQ9Y223 722 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 TJP1Q07157 1748 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 KRBA1A5PL33 1030 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 TSPAN9O75954 239 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 CRYZL1O95825 349 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 EGFRP00533 1210 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 SLC9A1P19634 815 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 COPAP53621 1224 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 RHBDF2Q6PJF5 856 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 CCDC81Q6ZN84 652 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 ACMSDQ8TDX5 336 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 SLCO2A1Q92959 643 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 C1orf50Q9BV19 199 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 GCOM2Q9BZD3 368 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 AASDHPPTQ9NRN7 309 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 RNF146Q9NTX7 359 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 VPS51Q9UID3 782 aa11.24□□□□□ -0.61
CLSTN3-207ENST00000537408 MYMKA6NI61 221 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 CASP5P51878 434 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 SCARA3Q6AZY7 606 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 TMEM126BQ8IUX1 230 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 FAM20CQ8IXL6 584 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 SHISA4Q96DD7 197 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 RNF186Q9NXI6 227 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 POLIQ9UNA4 740 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 CNTNAP1P78357 1384 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 MEI4A8MW99 385 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 LPXNO60711 386 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 UBL4AP11441 157 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 RCVRNP35243 200 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 IST1P53990 364 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 TAS2R42Q7RTR8 314 aa11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 PTCD2Q8WV60 388 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-207ENST00000537408 TRUB1Q8WWH5 349 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms