RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	EDEM1	Q92611	657 aa		11.38	□□□□□ -0.59
LDHA-215	ENST00000537296	P2RY11	Q96G91	374 aa		11.38	□□□□□ -0.59
LDHA-215	ENST00000537296	MSANTD3	Q96H12	275 aa		11.38	□□□□□ -0.59
LDHA-215	ENST00000537296	LRRC4	Q9HBW1	653 aa		11.38	□□□□□ -0.59
LDHA-215	ENST00000537296	TJP2	Q9UDY2	1190 aa		11.38	□□□□□ -0.59
LDHA-215	ENST00000537296	RASAL2	Q9UJF2	1139 aa		11.38	□□□□□ -0.59
LDHA-215	ENST00000537296	FHOD1	Q9Y613	1164 aa		11.38	□□□□□ -0.59
LDHA-215	ENST00000537296	WDR87	Q6ZQQ6	2873 aa		11.38	□□□□□ -0.59
LDHA-215	ENST00000537296	E2F8	A0AVK6	867 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	FAM170A	A1A519	330 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	TRDMT1	O14717	391 aa	Known RBP	11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	NCAM2	O15394	837 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	THAP12	O43422	761 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	KLKB1	P03952	638 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	NUDT7	P0C024	238 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	SP9	P0CG40	484 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	GNA15	P30679	374 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	SLC6A11	P48066	632 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	DAOA	P59103	153 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	MYL5	Q02045	173 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	EFEMP1	Q12805	493 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	ANO6	Q4KMQ2	910 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	LY6G5C	Q5SRR4	150 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	TMEM25	Q86YD3	366 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	AOPEP	Q8N6M6	819 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	P2RY13	Q9BPV8	354 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	LSM14B	Q9BX40	385 aa	Known RBP	11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	CLIC5	Q9NZA1	410 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	DNMT3L	Q9UJW3	386 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	SH3BP1	Q9Y3L3	701 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296		R4GN57	208 aa		11.37	□□□□□ -0.59
LDHA-215	ENST00000537296	EPHB6	O15197	1021 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	LAMTOR5	O43504	91 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	STC2	O76061	302 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	NFATC1	O95644	943 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	ATP1A3	P13637	1013 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	ZNF18	P17022	549 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	CLCN1	P35523	988 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	SATB1	Q01826	763 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	CSTF1	Q05048	431 aa	Known RBP	11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	RAPGEF1	Q13905	1077 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	KLHDC7A	Q5VTJ3	777 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	BSPRY	Q5W0U4	402 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	KLHDC10	Q6PID8	442 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	HTR3D	Q70Z44	454 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	ENOSF1	Q7L5Y1	443 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	APTX	Q7Z2E3	356 aa	Known RBP	11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	SLC47A2	Q86VL8	602 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	PASD1	Q8IV76	773 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	SCUBE3	Q8IX30	993 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	SIX6OS1	Q8N1H7	587 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	WDTC1	Q8N5D0	677 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	NAA15	Q9BXJ9	866 aa	Known RBP	11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	MIS12	Q9H081	205 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	PRMT8	Q9NR22	394 aa	Predicted RBP	11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	SFMBT1	Q9UHJ3	866 aa		11.36	□□□□□ -0.59
LDHA-215	ENST00000537296	SLC9A3R1	O14745	358 aa	Predicted RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	TRIM24	O15164	1050 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	RNF40	O75150	1001 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	RALA	P11233	206 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	ADH5	P11766	374 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	TDGF1	P13385	188 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	MAGEA9	P43362	315 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	DMWD	Q09019	674 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	LRRC32	Q14392	662 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	DRAP1	Q14919	205 aa	Predicted RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	STIL	Q15468	1287 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	BTBD8	Q5XKL5	378 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	C1orf228	Q6PIY5	440 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296		Q6ZNB5	142 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	RSRC2	Q7L4I2	434 aa	Known RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	ALYREF	Q86V81	257 aa	Known RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	DHX40	Q8IX18	779 aa	Known RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	ZNF276	Q8N554	614 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	NAT16	Q8N8M0	369 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	CD101	Q93033	1021 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	BHMT	Q93088	406 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	PIWIL1	Q96J94	861 aa	Known RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	FUCA2	Q9BTY2	467 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	GAN	Q9H2C0	597 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	PLCB1	Q9NQ66	1216 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	CNGB3	Q9NQW8	809 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	ST7	Q9NRC1	585 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	MARCH2	Q9P0N8	246 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	TBC1D14	Q9P2M4	693 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	EML5	Q05BV3	1969 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	SLC12A8	A0AV02	714 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	SYCE3	A1L190	88 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296		E5RJQ4	531 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	MSI1	O43347	362 aa	Known RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	FYN	P06241	537 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	HOXB1	P14653	301 aa	Predicted RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	UCHL3	P15374	230 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	NBL1	P41271	181 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	RPL34	P49207	117 aa	Known RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	COPB1	P53618	953 aa	Known RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	KDSR	Q06136	332 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms