RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 PIN4Q9Y237 131 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 USH1CQ9Y6N9 552 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 FAM47DPA6NHR8 397 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 DKC1O60832 514 aaKnown RBP eCLIP12.11□□□□□ -0.477e-14■■■□□ 18.8
CHRNB1-202ENST00000536404 ZC3H11AO75152 810 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 ACSL3O95573 720 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 CCDC166P0CW27 439 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 PPM1AP35813 382 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 ADCY8P40145 1251 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 BCAR1P56945 870 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 KCNJ2P63252 427 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 KCNC3Q14003 757 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 MYBPC3Q14896 1274 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 XKR9Q5GH70 373 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 KRT39Q6A163 491 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 CCDC80Q76M96 950 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 PALB2Q86YC2 1186 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 TDRPQ86YL5 185 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 ARHGEF19Q8IW93 802 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 C4orf19Q8IY42 314 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 UHMK1Q8TAS1 419 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 MGARPQ8TDB4 240 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 PSPC1Q8WXF1 523 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 LXNQ9BS40 222 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 DHX33Q9H6R0 707 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 MINDY3Q9H8M7 445 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 NGRNQ9NPE2 291 aaKnown RBP12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 FAM105AQ9NUU6 356 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 HCN4Q9Y3Q4 1203 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 C2CD2Q9Y426 696 aa12.11□□□□□ -0.47
CHRNB1-202ENST00000536404 LOC730098B7Z3J9 87 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 PSTPIP1O43586 416 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 TMCC1O94876 653 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 PLS3P13797 630 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 CYP11B1P15538 503 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 ZFXP17010 805 aaPredicted RBP12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 CHRNB2P17787 502 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 YWHABP31946 246 aaKnown RBP12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 RFC5P40937 340 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 MARCKSL1P49006 195 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 ITGA8P53708 1063 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 YARSP54577 528 aaKnown RBP12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 PPARDQ03181 441 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 LAMTOR4Q0VGL1 99 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 SPARCL1Q14515 664 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 RASA2Q15283 850 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 CCNG2Q16589 344 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 TSNAXIP1Q2TAA8 658 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 ANKRD20A2Q5SQ80 823 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 WASHC2DQ5SRD0 308 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 ANKRD20A1Q5TYW2 823 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 ANKRD20A3Q5VUR7 823 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 ANKRD54Q6NXT1 300 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 AADACL2Q6P093 401 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 SYCE2Q6PIF2 218 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 TMEM173Q86WV6 379 aaPredicted RBP12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 SLC7A3Q8WY07 619 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 DCLK3Q9C098 648 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 S1PR5Q9H228 398 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 LRMDAQ9H2I8 198 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 NRDE2Q9H7Z3 1164 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 TMEM8AQ9HCN3 771 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 HSPBP1Q9NZL4 362 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 INPP5FQ9Y2H2 1132 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 COQ4Q9Y3A0 265 aa12.1□□□□□ -0.47
CHRNB1-202ENST00000536404 C2orf71A6NGG8 1288 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 PRPF4O43172 522 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 ZNF623O75123 536 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 CXCL14O95715 111 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 KRT16P08779 473 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 DLATP10515 647 aaKnown RBP12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 SKIP12755 728 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 HOXA11P31270 313 aaPredicted RBP12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 GCLMP48507 274 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 GTF2BQ00403 316 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 FMO1Q01740 532 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 PPP3CAQ08209 521 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 EMC2Q15006 297 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 LRRC14Q15048 493 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 CLEC16AQ2KHT3 1053 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 CCDC92Q53HC0 331 aaPredicted RBP12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 NOMO2Q5JPE7 1267 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 UBXN11Q5T124 520 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 LIN9Q5TKA1 542 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 ARMC3Q5W041 872 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 TMEM184AQ6ZMB5 413 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 TRIM72Q6ZMU5 477 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 OTUD6AQ7L8S5 288 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 VSIG1Q86XK7 387 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 ZDHHC14Q8IZN3 488 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 PPM1KQ8N3J5 372 aa12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 MRPL43Q8N983 215 aaKnown RBP12.09□□□□□ -0.47
CHRNB1-202ENST00000536404 ZNF398Q8TD17 642 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms