RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ELOVL4Q9GZR5 314 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 MINDY3Q9H8M7 445 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 SAR1AQ9NR31 198 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 BARX2Q9UMQ3 279 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-203ENST00000535977 USP18Q9UMW8 372 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 COL1A2P08123 1366 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-203ENST00000535977 A0A0J9YVX5 310 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 MIPP30301 263 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 GPD2P43304 727 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 SH3BGRP55822 239 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-203ENST00000535977 SLC45A4Q5BKX6 768 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 PDIK1LQ8N165 341 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 CXorf38Q8TB03 319 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 GTF3C2Q8WUA4 911 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-203ENST00000535977 CPT1BQ92523 772 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 ADPGKQ9BRR6 497 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 CNPY3Q9BT09 278 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 TXNRD2Q9NNW7 524 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 PABPC4LP0CB38 370 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 RPL22P35268 128 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 RBP5P82980 135 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 INCA1Q0VD86 236 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 CBX3Q13185 183 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 CBLBQ13191 982 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 FASTKD3Q14CZ7 662 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 SMTNL2Q2TAL5 461 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 Q3C1V9 767 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 KIAA0319LQ8IZA0 1049 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 ALKBH8Q96BT7 664 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 NMD3Q96D46 503 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 HPDLQ96IR7 371 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 HEXIM2Q96MH2 286 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 SMYD3Q9H7B4 428 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 IL1RAPL1Q9NZN1 696 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 OTOFQ9HC10 1997 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 TMEM221A6NGB7 291 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 M0QYV0 167 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 RNASEH1O60930 286 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 ENDOD1O94919 500 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 ZWINTO95229 277 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 GJB1P08034 283 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 SERPINB3P29508 390 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 EIF3EP60228 445 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 DYNLT1P63172 113 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 HPCAP84074 193 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 THOC5Q13769 683 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 TMEM132DQ14C87 1099 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 PKN2Q16513 984 aaKnown RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 MAP7D3Q8IWC1 876 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 TMEM192Q8IY95 271 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 ST13P4Q8IZP2 240 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-203ENST00000535977 RNPEPQ9H4A4 650 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 PDZD7Q9H5P4 517 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 RABGEF1Q9UJ41 708 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 GRID1Q9ULK0 1009 aa18.61■□□□□ 0.57
RAB40C-203ENST00000535977 HNRNPCL1O60812 293 aaKnown RBP18.6■□□□□ 0.57
RAB40C-203ENST00000535977 INSRRP14616 1297 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 PDK4Q16654 411 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 AMHR2Q16671 573 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 KCNT1Q5JUK3 1230 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 LINC01465Q8N7H1 131 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 COPS5Q92905 334 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 ABTB1Q969K4 478 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-203ENST00000535977 DNAJC1Q96KC8 554 aaKnown RBP18.6■□□□□ 0.57
RAB40C-203ENST00000535977 FRMD8Q9BZ67 464 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-203ENST00000535977 ARL8BQ9NVJ2 186 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 GYG2O15488 501 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 IQCF3P0C7M6 154 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 GPD1P21695 349 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 SNX16P57768 344 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 DSG1Q02413 1049 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.6■□□□□ 0.57
RAB40C-203ENST00000535977 DUS1LQ6P1R4 473 aaKnown RBP18.6■□□□□ 0.57
RAB40C-203ENST00000535977 ADGRD1Q6QNK2 874 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 LCLAT1Q6UWP7 414 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 RFX8Q6ZV50 586 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 RNF168Q8IYW5 571 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-203ENST00000535977 NME8Q8N427 588 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 MCUR1Q96AQ8 359 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 CLMNQ96JQ2 1002 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 ACSS3Q9H6R3 686 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 TJP2Q9UDY2 1190 aa18.6■□□□□ 0.57
RAB40C-203ENST00000535977 ADM5C9JUS6 153 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 HNRNPCP07910 306 aaKnown RBP eCLIP18.59■□□□□ 0.57
RAB40C-203ENST00000535977 GRIA2P42262 883 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 GPX6P59796 221 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 SLC10A6Q3KNW5 377 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 FAM102AQ5T9C2 384 aaPredicted RBP18.59■□□□□ 0.57
RAB40C-203ENST00000535977 C3orf62Q6ZUJ4 267 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 CDR2LQ86X02 465 aaPredicted RBP18.59■□□□□ 0.57
RAB40C-203ENST00000535977 PALM2Q8IXS6 379 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 EMC1Q8N766 993 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 AFG1LQ8WV93 481 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 ECSITQ9BQ95 431 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 IQCGQ9H095 443 aaKnown RBP18.59■□□□□ 0.57
RAB40C-203ENST00000535977 PCSK1NQ9UHG2 260 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 A0A087WZ62 844 aa18.59■□□□□ 0.57
RAB40C-203ENST00000535977 RBM47A0AV96 593 aaKnown RBP18.59■□□□□ 0.57
RAB40C-203ENST00000535977 SPAG6O75602 509 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms