RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 GRIA2P42262 883 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 YWHAEP62258 255 aaKnown RBP11.37□□□□□ -0.59
CCDC60-202ENST00000535685 LSM11P83369 360 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC60-202ENST00000535685 DMC1Q14565 340 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 CSRP2Q16527 193 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 RAB41Q5JT25 222 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 LY6G5CQ5SRR4 150 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 HEATR6Q6AI08 1181 aaKnown RBP11.37□□□□□ -0.59
CCDC60-202ENST00000535685 ADGRD1Q6QNK2 874 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 PRR23BQ6ZRT6 265 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 CACNA2D4Q7Z3S7 1137 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 TADA2BQ86TJ2 420 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 RASSF3Q86WH2 238 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 UBR7Q8N806 425 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 ANKRD52Q8NB46 1076 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 EEF2KMTQ96G04 330 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 CDK5RAP1Q96SZ6 601 aaKnown RBP11.37□□□□□ -0.59
CCDC60-202ENST00000535685 MMRN2Q9H8L6 949 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 NMUR1Q9HB89 426 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 SPHK2Q9NRA0 654 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC60-202ENST00000535685 OSER1Q9NX31 292 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 MARK1Q9P0L2 795 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 MAN1B1Q9UKM7 699 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 KIAA1257Q9ULG3 409 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 MMP17Q9ULZ9 603 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 SH3BP1Q9Y3L3 701 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 CACNA1EQ15878 2313 aa11.37□□□□□ -0.59
CCDC60-202ENST00000535685 CYP26A1O43174 497 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 RPP40O75818 363 aaKnown RBP11.36□□□□□ -0.59
CCDC60-202ENST00000535685 KAT7O95251 611 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 APODP05090 189 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 TBXAS1P24557 533 aaPredicted RBP11.36□□□□□ -0.59
CCDC60-202ENST00000535685 HOXC13P31276 330 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 KIR2DL1P43626 348 aaPredicted RBP11.36□□□□□ -0.59
CCDC60-202ENST00000535685 PLA2G4AP47712 749 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 MARSP56192 900 aaKnown RBP11.36□□□□□ -0.59
CCDC60-202ENST00000535685 GOLGA8FQ08AF8 430 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 GOLGA8DPQ0D2H9 430 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 SRSF5Q13243 272 aaKnown RBP11.36□□□□□ -0.59
CCDC60-202ENST00000535685 CUL2Q13617 745 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 MORC3Q14149 939 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 PM20D1Q6GTS8 502 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 TTI2Q6NXR4 508 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 Q6ZNB5 142 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 CEP68Q76N32 757 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 SCD5Q86SK9 330 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 C11orf74Q86VG3 221 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 C12orf40Q86WS4 652 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 BBS7Q8IWZ6 715 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 FAM160A2Q8N612 972 aaPredicted RBP11.36□□□□□ -0.59
CCDC60-202ENST00000535685 TTC16Q8NEE8 873 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 CCDC97Q96F63 343 aaPredicted RBP11.36□□□□□ -0.59
CCDC60-202ENST00000535685 HEXIM2Q96MH2 286 aaKnown RBP11.36□□□□□ -0.59
CCDC60-202ENST00000535685 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCDC60-202ENST00000535685 DNMT3LQ9UJW3 386 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 STARD13Q9Y3M8 1113 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 PCDHGA5Q9Y5G8 931 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 PCNX2A6NKB5 2137 aa11.36□□□□□ -0.59
CCDC60-202ENST00000535685 A0A1W2PQH9 124 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 BICDL2A1A5D9 508 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 TRIM49BA6NDI0 452 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 CFAP99D6REC4 459 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 EPN2O95208 641 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 TBX18O95935 607 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 RARGP13631 454 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 BMP6P22004 513 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 SLC6A11P48066 632 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 FMO5P49326 533 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 DGKEP52429 567 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 CRY1Q16526 586 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 RSPO4Q2I0M5 234 aaPredicted RBP11.35□□□□□ -0.59
CCDC60-202ENST00000535685 ZNF394Q53GI3 561 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 DCAF17Q5H9S7 520 aaPredicted RBP11.35□□□□□ -0.59
CCDC60-202ENST00000535685 TCERG1LQ5VWI1 586 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.35□□□□□ -0.59
CCDC60-202ENST00000535685 SCML4Q8N228 414 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 ARHGAP18Q8N392 663 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 ERCC4Q92889 916 aaPredicted RBP11.35□□□□□ -0.59
CCDC60-202ENST00000535685 WBP2Q969T9 261 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 CNOT6LQ96LI5 555 aaKnown RBP11.35□□□□□ -0.59
CCDC60-202ENST00000535685 RTKNQ9BST9 563 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 NACA2Q9H009 215 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 ARHGEF4Q9NR80 690 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 SEMA4GQ9NTN9 838 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 WDR35Q9P2L0 1181 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 LSM7Q9UK45 103 aaKnown RBP11.35□□□□□ -0.59
CCDC60-202ENST00000535685 ZNF510Q9Y2H8 683 aa11.35□□□□□ -0.59
CCDC60-202ENST00000535685 ASCC3Q8N3C0 2202 aaKnown RBP11.35□□□□□ -0.59
CCDC60-202ENST00000535685 TNRC6BQ9UPQ9 1833 aaKnown RBP11.35□□□□□ -0.59
CCDC60-202ENST00000535685 DNAH14Q0VDD8 3507 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 XPO1O14980 1071 aaKnown RBP11.34□□□□□ -0.59
CCDC60-202ENST00000535685 CACNG3O60359 315 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 TULP3O75386 442 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 GNA14O95837 355 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 PAEPP09466 180 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 ZNF806P0C7X5 589 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 RALAP11233 206 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 VDRP11473 427 aa11.34□□□□□ -0.59
CCDC60-202ENST00000535685 BCAT1P54687 386 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms