RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 GMIPQ9P107 970 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 IGSF10Q6WRI0 2623 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 TCRBV21S2A2A0A5A6 115 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 MAP3K13O43283 966 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 PHACTR2O75167 634 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 DKK1O94907 266 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 ZNF883P0CG24 379 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 ITPKAP23677 461 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 GTF2H1P32780 548 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 CASP4P49662 377 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 NDST1P52848 882 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 GFPT1Q06210 699 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 ZNF33AQ06730 810 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 GOLGA8FQ08AF8 430 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 GOLGA8DPQ0D2H9 430 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 C10orf76Q5T2E6 689 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 GRAMD4Q6IC98 578 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 RAB44Q7Z6P3 723 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 TADA2BQ86TJ2 420 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 ACOT1Q86TX2 421 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 NELFCDQ8IXH7 590 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 TMEFF1Q8IYR6 380 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 FRMD1Q8N878 549 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 IPO4Q8TEX9 1081 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 NOC3LQ8WTT2 800 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 HMGB4Q8WW32 186 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 RLN3Q8WXF3 142 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 WBP2Q969T9 261 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 MRGPRX1Q96LB2 322 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 SCNM1Q9BWG6 230 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 SLC2A11Q9BYW1 496 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 OSER1Q9NX31 292 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 FAM13BQ9NYF5 915 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 CALCOCO1Q9P1Z2 691 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 USP36Q9P275 1121 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 SUSD2Q9UGT4 822 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 DNMT3LQ9UJW3 386 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 CFAP45Q9UL16 551 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 ZMIZ1Q9ULJ6 1067 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 HPSEQ9Y251 543 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 INVSQ9Y283 1065 aa11.83□□□□□ -0.52
CLSTN3-206ENST00000535668 CEP192Q8TEP8 1941 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 C1QTNF9BB2RNN3 333 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 PRRT4C9JH25 899 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 CILPO75339 1184 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 RHOBTB3O94955 611 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 ABL1P00519 1130 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 SYPP08247 313 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 C1QTNF9P0C862 333 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 FAM200BP0CF97 657 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 ZSCAN22P10073 491 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 CD59P13987 128 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 HOXB2P14652 356 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 TYRP14679 529 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 NDUFV2P19404 249 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 CMA1P23946 247 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 CHKAP35790 457 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 COG7P83436 770 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 BIRC3Q13489 604 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 EIF4HQ15056 248 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 ZNF423Q2M1K9 1284 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 RAB41Q5JT25 222 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 INTS8Q75QN2 995 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 SLC41A1Q8IVJ1 513 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 CPXM2Q8N436 756 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 C1orf216Q8TAB5 229 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 PAGE5Q96GU1 130 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 NT5C1AQ9BXI3 368 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 DUSP16Q9BY84 665 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 OSGEPQ9NPF4 335 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 ITM2CQ9NQX7 267 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 KIAA1522Q9P206 1035 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 THAP10Q9P2Z0 257 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 STOML2Q9UJZ1 356 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 LSM7Q9UK45 103 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 CKAP5Q14008 2032 aa11.82□□□□□ -0.52
CLSTN3-206ENST00000535668 TIMM44O43615 452 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 KIF20AO95235 890 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 TBX18O95935 607 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 F13A1P00488 732 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 NR3C1P04150 777 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 DLG4P78352 724 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 RPL6Q02878 288 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 KDSRQ06136 332 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 FYB2Q5VWT5 728 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 EGFLAMQ63HQ2 1017 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 PM20D1Q6GTS8 502 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 SDE2Q6IQ49 451 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 SCD5Q86SK9 330 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 SCML4Q8N228 414 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 C12orf29Q8N999 325 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 CYFIP2Q96F07 1278 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 P2RY11Q96G91 374 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 PIWIL1Q96J94 861 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 BBS2Q9BXC9 721 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 DCLK3Q9C098 648 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 DNAI2Q9GZS0 605 aa11.81□□□□□ -0.52
CLSTN3-206ENST00000535668 BLZF1Q9H2G9 400 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms