RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 NOP53Q9NZM5 478 aaKnown RBP12.5□□□□□ -0.41
LINC01089-204ENST00000535643 COL20A1Q9P218 1284 aa12.5□□□□□ -0.41
LINC01089-204ENST00000535643 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
LINC01089-204ENST00000535643 METRNQ9UJH8 293 aa12.5□□□□□ -0.41
LINC01089-204ENST00000535643 PNMA2Q9UL42 364 aa12.5□□□□□ -0.41
LINC01089-204ENST00000535643 ATP8A1Q9Y2Q0 1164 aa12.5□□□□□ -0.41
LINC01089-204ENST00000535643 COL4A2P08572 1712 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 E9PMD0 336 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 M0QZ92 97 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 TEX28O15482 410 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 BUB1BO60566 1050 aaPredicted RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 ZC3H11AO75152 810 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 TBCAO75347 108 aaKnown RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 SUN1O94901 812 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 LUC7L3O95232 432 aaKnown RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 ADH1AP07327 375 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 PTGIRP43119 386 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 CCNG1P51959 295 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 CLNS1AP54105 237 aaKnown RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 IRX1P78414 480 aaPredicted RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 CAV1Q03135 178 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 TLE3Q04726 772 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 GRM2Q14416 872 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 ZKSCAN8Q15776 578 aaPredicted RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 GALNTL6Q49A17 601 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 CMPK2Q5EBM0 449 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 ARSHQ5FYA8 562 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 SEL1L2Q5TEA6 688 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 HIBCHQ6NVY1 386 aaPredicted RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 ZDHHC24Q6UX98 284 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 CEP57Q86XR8 500 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 OLIG1Q8TAK6 271 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 LNX1Q8TBB1 728 aaPredicted RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 MAIP1Q8WWC4 291 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 TTC9Q92623 222 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 SCLT1Q96NL6 688 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 DPH5Q9H2P9 285 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 PSTPIP2Q9H939 334 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 MRPL17Q9NRX2 175 aaKnown RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 RPL26L1Q9UNX3 145 aaKnown RBP12.49□□□□□ -0.41
LINC01089-204ENST00000535643 C15orf41Q9Y2V0 281 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 PCDHB9Q9Y5E1 797 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 ACTL7BQ9Y614 415 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 KAT6AQ92794 2004 aa12.49□□□□□ -0.41
LINC01089-204ENST00000535643 SPDYE3A6NKU9 549 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 E7ENQ6 273 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 NOP56O00567 594 aaKnown RBP12.48□□□□□ -0.41
LINC01089-204ENST00000535643 SH3BP5O60239 455 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 SNX3O60493 162 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 ATP5HO75947 161 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 NQO1P15559 274 aaKnown RBP12.48□□□□□ -0.41
LINC01089-204ENST00000535643 SPIRE1Q08AE8 756 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 NFATC3Q12968 1075 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 CNGA2Q16280 664 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 PMS2CLQ68D20 193 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 SLC9A9Q8IVB4 645 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 NPAS3Q8IXF0 933 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 ADGRF4Q8IZF3 695 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 CEP120Q8N960 986 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 SLC35G2Q8TBE7 412 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 DCAF4Q8WV16 495 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 CRYGNQ8WXF5 182 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 PIGKQ92643 395 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 SELENOSQ9BQE4 189 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 FGFBP2Q9BYJ0 223 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 ANO3Q9BYT9 981 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 VAT1LQ9HCJ6 419 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 GRHL1Q9NZI5 618 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 KCND2Q9NZV8 630 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 WHRNQ9P202 907 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 CTNNAL1Q9UBT7 734 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 USP20Q9Y2K6 914 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 CELSR1Q9NYQ6 3014 aa12.48□□□□□ -0.41
LINC01089-204ENST00000535643 FAM149AA5PLN7 773 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 ABLIM1O14639 778 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 RASGRF2O14827 1237 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 PMM2O15305 246 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 RTN2O75298 545 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 GJB6O95452 261 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
LINC01089-204ENST00000535643 TNFAIP3P21580 790 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 CIITAP33076 1130 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 FMO5P49326 533 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 TRAF1Q13077 416 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 ALCAMQ13740 583 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 GRIK4Q16099 956 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 ZNF568Q3ZCX4 644 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 SPDYAQ5MJ70 313 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 DCAF12L1Q5VU92 463 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 TANGO2Q6ICL3 276 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 PKN3Q6P5Z2 889 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 ATG14Q6ZNE5 492 aa12.47□□□□□ -0.41
LINC01089-204ENST00000535643 FAM43BQ6ZT52 329 aaPredicted RBP12.47□□□□□ -0.41
LINC01089-204ENST00000535643 FAM186BQ8IYM0 893 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms