RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 LONRF1Q17RB8 773 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 AWAT1Q58HT5 328 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 FAM209BQ5JX69 171 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 CCDC181Q5TID7 509 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 MORN5Q5VZ52 161 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 MRNIPQ6NTE8 343 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 SLC2A7Q6PXP3 512 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 LINC01465Q8N7H1 131 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 EDC3Q96F86 508 aaKnown RBP6□□□□□ -1.45
PRKDC-205ENST00000535375 AS3MTQ9HBK9 375 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 GJB4Q9NTQ9 266 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 GAR1Q9NY12 217 aaKnown RBP6□□□□□ -1.45
PRKDC-205ENST00000535375 ZNF70Q9UC06 446 aaPredicted RBP6□□□□□ -1.45
PRKDC-205ENST00000535375 H3BNC9 293 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 ZSCAN9O15535 394 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-205ENST00000535375 TMIGD3P0DMS9 266 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-205ENST00000535375 MMP13P45452 471 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 GPC5P78333 572 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 PFKFB3Q16875 520 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-205ENST00000535375 KRT73Q86Y46 540 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 PRSS3P2Q8NHM4 247 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 SUN3Q8TAQ9 357 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 OSR1Q8TAX0 266 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-205ENST00000535375 DENND1AQ8TEH3 1009 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 CUL5Q93034 780 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 RPL36ALQ969Q0 106 aaKnown RBP5.99□□□□□ -1.45
PRKDC-205ENST00000535375 ADGRE3Q9BY15 652 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 PRSS22Q9GZN4 317 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 PCDHAC1Q9H158 963 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 KLHL13Q9P2N7 655 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 PI4KBQ9UBF8 816 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 SCAF8Q9UPN6 1271 aaKnown RBP5.99□□□□□ -1.45
PRKDC-205ENST00000535375 MAN2B2Q9Y2E5 1009 aa5.99□□□□□ -1.45
PRKDC-205ENST00000535375 A0A087WZ62 844 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 CYP2D7A0A087X1C5 515 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 FYB1O15117 783 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 HARSP12081 509 aaKnown RBP5.98□□□□□ -1.45
PRKDC-205ENST00000535375 TNFSF4P23510 183 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 HTR7P34969 479 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 SSBP2P81877 361 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-205ENST00000535375 ACOX1Q15067 660 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.98□□□□□ -1.45
PRKDC-205ENST00000535375 GRHL2Q6ISB3 625 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 HIBCHQ6NVY1 386 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-205ENST00000535375 FBXO38Q6PIJ6 1188 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 CCDC28AQ8IWP9 274 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.98□□□□□ -1.45
PRKDC-205ENST00000535375 PARD3BQ8TEW8 1205 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 BRI3BPQ8WY22 251 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 ZNF566Q969W8 418 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 GRAMD1AQ96CP6 724 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 HIC2Q96JB3 615 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 CCDC138Q96M89 665 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 ZNF778Q96MU6 729 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.98□□□□□ -1.454e-6■■■□□ 15
PRKDC-205ENST00000535375 ZMYND8Q9ULU4 1186 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-205ENST00000535375 FZD4Q9ULV1 537 aa5.98□□□□□ -1.45
PRKDC-205ENST00000535375 INO80B-WBP1J3KQ70 363 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 KCNQ3O43525 872 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 DRD1P21728 446 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 PBX1P40424 430 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 AK2P54819 239 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 GHRHRQ02643 423 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 BFSP2Q13515 415 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 DAZAP2Q15038 168 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-205ENST00000535375 ABLIM2Q6H8Q1 611 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 TNIP3Q96KP6 325 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 RIPOR3Q96MK2 946 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 ARNT2Q9HBZ2 717 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 BTBD3Q9Y2F9 522 aa5.97□□□□□ -1.45
PRKDC-205ENST00000535375 COL3A1P02461 1466 aaPredicted RBP5.96□□□□□ -1.45
PRKDC-205ENST00000535375 PRAMEF2O60811 474 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 FGF18O76093 207 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 ARP10275 920 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 SLC5A2P31639 672 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 GALNSP34059 522 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 JAK3P52333 1124 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 MTAPQ13126 283 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 SLC14A1Q13336 389 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 DNASE1L3Q13609 305 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 PMS2P11Q13670 270 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 TRIP6Q15654 476 aaKnown RBP5.96□□□□□ -1.46
PRKDC-205ENST00000535375 P3H1Q32P28 736 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 AASDHQ4L235 1098 aaPredicted RBP5.96□□□□□ -1.46
PRKDC-205ENST00000535375 PXDC1Q5TGL8 231 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 IL31Q6EBC2 164 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 ANO7Q6IWH7 933 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 KIAA0408Q6ZU52 694 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 TTC30AQ86WT1 665 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 PNISRQ8TF01 805 aaKnown RBP5.96□□□□□ -1.46
PRKDC-205ENST00000535375 EIF3CQ99613 913 aaKnown RBP5.96□□□□□ -1.46
PRKDC-205ENST00000535375 C1QTNF7Q9BXJ2 289 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 ARL8BQ9NVJ2 186 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 VPS4AQ9UN37 437 aa5.96□□□□□ -1.46
PRKDC-205ENST00000535375 RASA4BC9J798 803 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 RASA4O43374 803 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 NCK2O43639 380 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 NDST3O95803 873 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 VIPP01282 170 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms