RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 TRIM10Q9UDY6 481 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 IFT172Q9UG01 1749 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 ZNF185O15231 689 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 RPN2P04844 631 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 ALDH9A1P49189 494 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 OXCT1P55809 520 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 CYP24A1Q07973 514 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 FNDC3BQ53EP0 1204 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 CATSPERGQ6ZRH7 1159 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 ADGRF2Q8IZF7 708 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 ANKS1AQ92625 1134 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 RPRD1AQ96P16 312 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 POP1Q99575 1024 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 GINS4Q9BRT9 223 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 HMX1Q9NP08 348 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 TMCC3Q9ULS5 477 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 SNX12Q9UMY4 172 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 RUVBL2Q9Y230 463 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 KLHL20Q9Y2M5 609 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 VPS26AO75436 327 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 AMHP03971 560 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 CD44P16070 742 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 NOS3P29474 1203 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 STIP1P31948 543 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 CLK1P49759 484 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 C21orf59P57076 290 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 GUCY1A3Q02108 690 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 CSTF3Q12996 717 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 CYP51A1Q16850 503 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 C11orf88Q6PI97 169 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 C16orf89Q6UX73 402 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 CACUL1Q86Y37 369 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 OSCP1Q8WVF1 389 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 TRAPPC12Q8WVT3 735 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 SH3GL2Q99962 352 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 RMND5AQ9H871 391 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 NOP53Q9NZM5 478 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 TRPC4Q9UBN4 977 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 CHORDC1Q9UHD1 332 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 XPO7Q9UIA9 1087 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 NR2E3Q9Y5X4 410 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 GMNCA6NCL1 334 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 TRIM13O60858 407 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 STAU1O95793 577 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 APRTP07741 180 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 RAG1P15918 1043 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 ACO1P21399 889 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 FGFR4P22455 802 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 DEFA1P59665 94 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 DEFA3P59666 94 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 RAB14P61106 215 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 DOK6Q6PKX4 331 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 MOB2Q70IA6 237 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 EFL1Q7Z2Z2 1120 aaKnown RBP9.09□□□□□ -0.95
CTNND1-237ENST00000534579 TC2NQ8N9U0 490 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 PCYOX1LQ8NBM8 494 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 SPATA4Q8NEY3 305 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 FEZF2Q8TBJ5 459 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 ERGIC2Q96RQ1 377 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 VPS28Q9UK41 221 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 BLOC1S6Q9UL45 172 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 FMN2Q9NZ56 1722 aa9.09□□□□□ -0.95
CTNND1-237ENST00000534579 GNG14A0A1W2PPG7 69 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 CASTOR2A6NHX0 329 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 PDZK1P1A8MUH7 402 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 TMEM253P0C7T8 217 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 UMPSP11172 480 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 COMTP21964 271 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 PON1P27169 355 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 MAPK1P28482 360 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 CCR4P51679 360 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 FSCN1Q16658 493 aaKnown RBP9.08□□□□□ -0.96
CTNND1-237ENST00000534579 CTXN3Q4LDR2 81 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 EARS2Q5JPH6 523 aaKnown RBP9.08□□□□□ -0.96
CTNND1-237ENST00000534579 ESRP1Q6NXG1 681 aaKnown RBP9.08□□□□□ -0.96
CTNND1-237ENST00000534579 NIPA1Q7RTP0 329 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 TRMT11Q7Z4G4 463 aaKnown RBP9.08□□□□□ -0.96
CTNND1-237ENST00000534579 UXS1Q8NBZ7 420 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 MED8Q96G25 268 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 CXCL8P10145 99 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 TCN1P20061 433 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-237ENST00000534579 RAP1GAPP47736 663 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 CLEC16AQ2KHT3 1053 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 PACS1Q6VY07 963 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 LRRC74BQ6ZQY2 392 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 R3HCC1LQ7Z5L2 792 aaKnown RBP9.08□□□□□ -0.96
CTNND1-237ENST00000534579 GATAD2AQ86YP4 633 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 KLHL3Q9UH77 587 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 VPS9D1Q9Y2B5 631 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 MGAT4DA6NG13 374 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 HLA-DQA2P01906 255 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 FGRP09769 529 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 PLIN5Q00G26 463 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 NFIL3Q16649 462 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 GALNTL6Q49A17 601 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 CRY2Q49AN0 593 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 OTOP1Q7RTM1 612 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 RIOX2Q8IUF8 465 aa9.08□□□□□ -0.96
CTNND1-237ENST00000534579 CENPLQ8N0S6 344 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-237ENST00000534579 MYO1HQ8N1T3 1032 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms