RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 IRF1P10914 325 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 CHRM1P11229 460 aaPredicted RBP8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 KRT13P13646 458 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 CCDC130P13994 396 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 HOXB2P14652 356 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 TYRP14679 529 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 RDXP35241 583 aaKnown RBP8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 ASPAP45381 313 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 VAMP7P51809 220 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 ZNF132P52740 706 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 ATXN3P54252 364 aaPredicted RBP8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 DLG4P78352 724 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 ZNF252P-AS1Q0IIN9 211 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 INCA1Q0VD86 236 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 MESP2Q0VG99 397 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 NFIL3Q16649 462 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 DUOXA1Q1HG43 343 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 CCDC183Q5T5S1 534 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 PEAR1Q5VY43 1037 aaPredicted RBP8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 HDDC3Q8N4P3 179 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 C12orf29Q8N999 325 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 ZMIZ2Q8NF64 920 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 RLN3Q8WXF3 142 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 CCDC34Q96HJ3 373 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 KLF16Q9BXK1 252 aaPredicted RBP8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 SDCBP2Q9H190 292 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 GOLPH3LQ9H4A5 285 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 FAM124BQ9H5Z6 455 aaPredicted RBP8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 DNAJC17Q9NVM6 304 aaKnown RBP8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 CLIC5Q9NZA1 410 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 DNMT3LQ9UJW3 386 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 PILRBQ9UKJ0 227 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 SLC6A14Q9UN76 642 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 CFAP47Q6ZTR5 3102 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 CKAP5Q14008 2032 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 IGF2RP11717 2491 aa8.85□□□□□ -0.99
RPUSD4-209ENST00000534393 CABIN1Q9Y6J0 2220 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 TMEM8BA6NDV4 472 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 UPK3BL1B0FP48 263 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 UPK3BL2E5RIL1 263 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 NEDD8-MDP1E9PL57 170 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 BEST1O76090 585 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 LETM1O95202 739 aaPredicted RBP8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 HLA-DRAP01903 254 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 CFIP05156 583 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 SYPP08247 313 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 SERPINF2P08697 491 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 RALAP11233 206 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 PFKFB1P16118 471 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 ENGP17813 658 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 GABRG2P18507 467 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 ACO1P21399 889 aaKnown RBP8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 NR2F2P24468 414 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 GTF2H1P32780 548 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 CHKAP35790 457 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 PSMC2P35998 433 aaKnown RBP8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 PTGER3P43115 390 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 DGKGP49619 791 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 NDUFA8P51970 172 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 SLC8A3P57103 927 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 COG7P83436 770 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 RPL6Q02878 288 aaKnown RBP8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 GFPT1Q06210 699 aaPredicted RBP8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 HNRNPDQ14103 355 aaKnown RBP8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 CAMK4Q16566 473 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 UAP1L1Q3KQV9 507 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 ZSCAN23Q3MJ62 389 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 C10orf120Q5SQS8 335 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 SYCP2LQ5T4T6 812 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 CLEC20AQ6ZU45 233 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 CCDC186Q7Z3E2 898 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 SFTPA1Q8IWL2 248 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 GRAMD1CQ8IYS0 662 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 ARHGAP18Q8N392 663 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 IPO4Q8TEX9 1081 aaKnown RBP8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 DCLK3Q9C098 648 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 NIF3L1Q9GZT8 377 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 FAM49BQ9NUQ9 324 aa8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 MBD1Q9UIS9 605 aaPredicted RBP8.84□□□□□ -0.99
RPUSD4-209ENST00000534393 FRYQ5TBA9 3013 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 PCDH15Q96QU1 1955 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 A0A1W2PQF6 199 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 ANTXRLA6NF34 631 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 HHLA1C9JL84 531 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 H0Y626 953 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 GIPC1O14908 333 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 STX10O60499 249 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 GREM1O60565 184 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 NDUFS2O75306 463 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 RHOBTB3O94955 611 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 ZNF202O95125 648 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 TRIM16O95361 564 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 TBX18O95935 607 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 RARGP13631 454 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 GNSP15586 552 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 ITPKAP23677 461 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 ADORA2BP29275 332 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 SYKP43405 635 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 MAPK8P45983 427 aa8.83□□□□□ -1
RPUSD4-209ENST00000534393 KIF11P52732 1056 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms