RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 C12orf29Q8N999 325 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 ZNF419Q96HQ0 510 aaPredicted RBP22.51■■□□□ 1.19
SSH3-211ENST00000534112 DNAAF2Q9NVR5 837 aaKnown RBP22.51■■□□□ 1.19
SSH3-211ENST00000534112 DMAC2Q9NW81 257 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 OSER1Q9NX31 292 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 HMGXB4Q9UGU5 601 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 SCML2Q9UQR0 700 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 RAD54BQ9Y620 910 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 PLXND1Q9Y4D7 1925 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 FREM2Q5SZK8 3169 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.5■■□□□ 1.19
SSH3-211ENST00000534112 CISD3P0C7P0 127 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 HOXB3P14651 431 aaPredicted RBP22.5■■□□□ 1.19
SSH3-211ENST00000534112 GOLGA8FQ08AF8 430 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 GOLGA8DPQ0D2H9 430 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 CUL4BQ13620 913 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 CHCHD4Q8N4Q1 142 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 MRGPRX1Q96LB2 322 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 SLC6A17Q9H1V8 727 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 FAM49BQ9NUQ9 324 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 CACNA2D2Q9NY47 1150 aa22.5■■□□□ 1.19
SSH3-211ENST00000534112 LSM7Q9UK45 103 aaKnown RBP22.5■■□□□ 1.19
SSH3-211ENST00000534112 FAM221BA6H8Z2 402 aa22.49■■□□□ 1.19
SSH3-211ENST00000534112 RPN1P04843 607 aaKnown RBP22.49■■□□□ 1.19
SSH3-211ENST00000534112 AFMP43652 599 aa22.49■■□□□ 1.19
SSH3-211ENST00000534112 DGKGP49619 791 aa22.49■■□□□ 1.19
SSH3-211ENST00000534112 DLG4P78352 724 aa22.49■■□□□ 1.19
SSH3-211ENST00000534112 COL9A2Q14055 689 aaPredicted RBP22.49■■□□□ 1.19
SSH3-211ENST00000534112 HNRNPDQ14103 355 aaKnown RBP22.49■■□□□ 1.19
SSH3-211ENST00000534112 GPRIN1Q7Z2K8 1008 aa22.49■■□□□ 1.19
SSH3-211ENST00000534112 UNC93AQ86WB7 457 aa22.49■■□□□ 1.19
SSH3-211ENST00000534112 RGL4Q8IZJ4 473 aa22.49■■□□□ 1.19
SSH3-211ENST00000534112 FAM124BQ9H5Z6 455 aaPredicted RBP22.49■■□□□ 1.19
SSH3-211ENST00000534112 CD93Q9NPY3 652 aa22.49■■□□□ 1.19
SSH3-211ENST00000534112 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.49■■□□□ 1.19
SSH3-211ENST00000534112 WASH3PC4AMC7 463 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 GFRA2O00451 464 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 CYP26A1O43174 497 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 NDUFS2O75306 463 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 FAM200BP0CF97 657 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 SLC14A1Q13336 389 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 ZNF423Q2M1K9 1284 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 PLEKHG6Q3KR16 790 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 ZACNQ401N2 412 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 SYCP2LQ5T4T6 812 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 KLHDC10Q6PID8 442 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 SLC9A9Q8IVB4 645 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 TAF4BQ92750 862 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 BHMTQ93088 406 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 CAMK1GQ96NX5 476 aa22.48■■□□□ 1.19
SSH3-211ENST00000534112 HHLA1C9JL84 531 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 MDM4O15151 490 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 SH3BP5O60239 455 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 GJB3O75712 270 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 ADORA2BP29275 332 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 ASPAP45381 313 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 PLA2G4AP47712 749 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 RING1Q06587 406 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 LRSAM1Q6UWE0 723 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 CLEC20AQ6ZU45 233 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 SV2AQ7L0J3 742 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 RAB44Q7Z6P3 723 aaPredicted RBP22.47■■□□□ 1.19
SSH3-211ENST00000534112 TMEM174Q8WUU8 243 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 FOXJ1Q92949 421 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 JAKMIP2Q96AA8 810 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 HNRNPABQ99729 332 aaKnown RBP22.47■■□□□ 1.19
SSH3-211ENST00000534112 NMUR1Q9HB89 426 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.47■■□□□ 1.19
SSH3-211ENST00000534112 PLK2Q9NYY3 685 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 SUSD2Q9UGT4 822 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 DNMT3LQ9UJW3 386 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 NUDT5Q9UKK9 219 aa22.47■■□□□ 1.19
SSH3-211ENST00000534112 LAMA5O15230 3695 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 A0A1W2PQH9 124 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 ASS1P00966 412 aaKnown RBP22.46■■□□□ 1.19
SSH3-211ENST00000534112 RARGP13631 454 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 ACO1P21399 889 aaKnown RBP22.46■■□□□ 1.19
SSH3-211ENST00000534112 MAOBP27338 520 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 STK4Q13043 487 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 TRIP6Q15654 476 aaKnown RBP22.46■■□□□ 1.19
SSH3-211ENST00000534112 SPOPLQ6IQ16 392 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 KIAA1324Q6UXG2 1013 aaKnown RBP22.46■■□□□ 1.19
SSH3-211ENST00000534112 Q6ZNB5 142 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 GRAMD1CQ8IYS0 662 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 P2RY11Q96G91 374 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 FAM13BQ9NYF5 915 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 FBXO10Q9UK96 956 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 PCDH15Q96QU1 1955 aa22.46■■□□□ 1.19
SSH3-211ENST00000534112 TAF4O00268 1085 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 GNSP15586 552 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 CD6P30203 668 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 WDR45BQ5MNZ6 344 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 C10orf120Q5SQS8 335 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 KIAA0895Q8NCT3 520 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 TMC2Q8TDI7 906 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 CYFIP2Q96F07 1278 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 TWNKQ96RR1 684 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 LHX6Q9UPM6 363 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 PCDHA5Q9Y5H7 936 aa22.45■■□□□ 1.18
SSH3-211ENST00000534112 STON1Q9Y6Q2 735 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms