RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 NCK2O43639 380 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 CLASP2O75122 1294 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 KRT7P08729 469 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 OR4Q2P0C623 313 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 GPD1P21695 349 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 CTNNA2P26232 953 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 GRIK1P39086 918 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 SSR1P43307 286 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 MAGEA11P43364 429 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 CLCN4P51793 760 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 ZNF143P52747 638 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 ITIH3Q06033 890 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 ADCY1Q08828 1119 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 PPP2R5EQ16537 467 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 LILRA6Q6PI73 481 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 OLFML1Q6UWY5 402 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 FAM183BPQ6ZVS7 135 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 RTL10Q7L3V2 364 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 POLNQ7Z5Q5 900 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 ADGRD2Q7Z7M1 963 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 IRGQQ8WZA9 623 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 TMEM209Q96SK2 561 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 PKMYT1Q99640 499 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 CNPY3Q9BT09 278 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 PLEKHA4Q9H4M7 779 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 MTMR10Q9NXD2 777 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 RRN3Q9NYV6 651 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 HSFX1Q9UBD0 423 aa11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 CHORDC1Q9UHD1 332 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-218ENST00000533761 EFCAB8A8MWE9 144 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 PGRMC1O00264 195 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 CLDN5O00501 218 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 PRRG1O14668 218 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 FANCGO15287 622 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 SRGAP2BP0DMP2 458 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 VSIG8P0DPA2 414 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 LCP1P13796 627 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 FOSL2P15408 326 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 PDGFRAP16234 1089 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 BDNFP23560 247 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 RFC1P35251 1148 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 TUFMP49411 452 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 DNA2P51530 1060 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 TKTL1P51854 596 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 RPL7AP62424 266 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 RPL10AP62906 217 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 ADIGQ0VDE8 80 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 TCEAL5Q5H9L2 206 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 ZFYVE27Q5T4F4 411 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 RNF19BQ6ZMZ0 732 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 CCDC149Q6ZUS6 474 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 SCML4Q8N228 414 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 MYRIPQ8NFW9 859 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 HDAC7Q8WUI4 952 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 MAIP1Q8WWC4 291 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 MYLIPQ8WY64 445 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 RBM41Q96IZ5 413 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 PGLYRP2Q96PD5 576 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 FBXO44Q9H4M3 255 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 IGFLR1Q9H665 355 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 DDX56Q9NY93 547 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 ABI2Q9NYB9 513 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 PCDHA3Q9Y5H8 950 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 HCFC2Q9Y5Z7 792 aa11.43□□□□□ -0.58
CCDC90B-218ENST00000533761 MTMR11A4FU01 709 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 CAPN9O14815 690 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 PAPSS1O43252 624 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 CEP104O60308 925 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 ZBED1O96006 694 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 SPATA31D3P0C874 917 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 PCK1P35558 622 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 YWHAZP63104 245 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 MRPS5P82675 430 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 HYAL1Q12794 435 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 DUSP4Q13115 394 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 RAB41Q5JT25 222 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 SPATA31D4Q6ZUB0 917 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 PAQR9Q6ZVX9 377 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 PHLDB2Q86SQ0 1253 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 TCEAL8Q8IYN2 117 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 ARHGAP18Q8N392 663 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 EFHBQ8N7U6 833 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 ATAD1Q8NBU5 361 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 KREMEN2Q8NCW0 462 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 ACTRT1Q8TDG2 376 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 SLC22A17Q8WUG5 538 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 UBXN4Q92575 508 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 FAM149B1Q96BN6 582 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 CAPZA3Q96KX2 299 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 C8orf48Q96LL4 319 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 GUCD1Q96NT3 240 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 PSMB7Q99436 277 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 GOLPH3Q9H4A6 298 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 CYP4F11Q9HBI6 524 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 POPDC2Q9HBU9 364 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 TMLHEQ9NVH6 421 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 PACSIN2Q9UNF0 486 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 USTQ9Y2C2 406 aa11.42□□□□□ -0.58
CCDC90B-218ENST00000533761 C2CD4BA6NLJ0 364 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 TULP2O00295 520 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms