RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	KLKB1	P03952	638 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	BRD2	P25440	801 aa	Known RBP	18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	PXN	P49023	591 aa	Predicted RBP	18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	SEC13	P55735	322 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	MRPS21	P82921	87 aa	Known RBP	18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	COG7	P83436	770 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	KDSR	Q06136	332 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	EFEMP1	Q12805	493 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	DPCR1	Q3MIW9	517 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	C2orf27A	Q580R0	203 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	BTBD8	Q5XKL5	378 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	GAB3	Q8WWW8	586 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	SECISBP2L	Q93073	1101 aa	Known RBP	18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	NUP62CL	Q9H1M0	184 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	CNGB3	Q9NQW8	809 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	EBF1	Q9UH73	591 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	RASAL2	Q9UJF2	1139 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	RAB23	Q9ULC3	237 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	MMP17	Q9ULZ9	603 aa		18.55	■□□□□ 0.56
BBS1-223	ENST00000533644	CACNG3	O60359	315 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	GABBR2	O75899	941 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	APBB3	O95704	486 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	TNFRSF4	P43489	277 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	KIR2DL1	P43626	348 aa	Predicted RBP	18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	LPAL2	Q16609	132 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	ANO4	Q32M45	955 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	HSF5	Q4G112	596 aa	Predicted RBP	18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	TRIM65	Q6PJ69	517 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	PRR23B	Q6ZRT6	265 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	KIAA2013	Q8IYS2	634 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	SIX6OS1	Q8N1H7	587 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	NDRG1	Q92597	394 aa	Known RBP	18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	IPO9	Q96P70	1041 aa	Known RBP	18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	LMBRD1	Q9NUN5	540 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	MARCH2	Q9P0N8	246 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	WDR35	Q9P2L0	1181 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	DEC1	Q9P2X7	70 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	GMEB2	Q9UKD1	530 aa		18.54	■□□□□ 0.56
BBS1-223	ENST00000533644	GTPBP10	A4D1E9	387 aa	Known RBP	18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	YJEFN3	A6XGL0	299 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644		E7ENQ6	273 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644		M0QYV0	167 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	CALCA	P01258	141 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	TGM1	P22735	817 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	ERCC5	P28715	1186 aa	Predicted RBP	18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	DAOA	P59103	153 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	PREPL	Q4J6C6	727 aa	Predicted RBP	18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	PMF1	Q6P1K2	205 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	RSRC2	Q7L4I2	434 aa	Known RBP	18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	ENOSF1	Q7L5Y1	443 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	GPR161	Q8N6U8	529 aa	Known RBP	18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	NAT16	Q8N8M0	369 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	TERB1	Q8NA31	727 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	IL17RC	Q8NAC3	791 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	CRACR2A	Q9BSW2	395 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	BBS2	Q9BXC9	721 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	DCLK3	Q9C098	648 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	THAP9	Q9H5L6	903 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	UBE2T	Q9NPD8	197 aa	Predicted RBP	18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	OLA1	Q9NTK5	396 aa	Known RBP	18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	STRIP2	Q9ULQ0	834 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	ZNF510	Q9Y2H8	683 aa		18.53	■□□□□ 0.56
BBS1-223	ENST00000533644	EML5	Q05BV3	1969 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	NEDD8-MDP1	E9PL57	170 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	AXIN1	O15169	862 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	RPP40	O75818	363 aa	Known RBP	18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	RET	P07949	1114 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	TYR	P14679	529 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	CORO1A	P31146	461 aa	Known RBP	18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	CRY1	Q16526	586 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	MEA1	Q16626	185 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	BSPRY	Q5W0U4	402 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	RASSF3	Q86WH2	238 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	CCDC33	Q8N5R6	958 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	ALLC	Q8N6M5	410 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	TSTD1	Q8NFU3	115 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	KCNV2	Q8TDN2	545 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	IRGQ	Q8WZA9	623 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	P2RY11	Q96G91	374 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	HSFY1	Q96LI6	401 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	FAM81B	Q96LP2	452 aa		18.52	■□□□□ 0.56
BBS1-223	ENST00000533644	SLC12A8	A0AV02	714 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	TRIM24	O15164	1050 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	KLF8	O95600	359 aa	Predicted RBP	18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	PENK	P01210	267 aa	Predicted RBP	18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	KRT5	P13647	590 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	LCP1	P13796	627 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	SLC9A1	P19634	815 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	RPL34	P49207	117 aa	Known RBP	18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	RGS7	P49802	495 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	DGKE	P52429	567 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	TRIP4	Q15650	581 aa	Predicted RBP	18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	EMC10	Q5UCC4	262 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	SMYD5	Q6GMV2	418 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	GRAMD4	Q6IC98	578 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	GBP6	Q6ZN66	633 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	TPGS1	Q6ZTW0	290 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	CEP68	Q76N32	757 aa		18.51	■□□□□ 0.55
BBS1-223	ENST00000533644	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.51	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms