RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 NETO1Q8TDF5 533 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 NT5C1BQ96P26 610 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 RTKNQ9BST9 563 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 TPSD1Q9BZJ3 242 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 LRRC4Q9HBW1 653 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 DNAJC17Q9NVM6 304 aaKnown RBP16.23■□□□□ 0.19
CPSF1-211ENST00000533492 RASAL2Q9UJF2 1139 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 TSPAN16Q9UKR8 245 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 KIAA1257Q9ULG3 409 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 INVSQ9Y283 1065 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 EML5Q05BV3 1969 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 KIAA1549LQ6ZVL6 1849 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 MYO18AQ92614 2054 aaKnown RBP16.22■□□□□ 0.19
CPSF1-211ENST00000533492 PPP1R3GB7ZBB8 358 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 SGK1O00141 431 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 DCLK1O15075 740 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 GREM1O60565 184 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 EPN2O95208 641 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 VDRP11473 427 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 TYRP14679 529 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 KIR2DL1P43626 348 aaPredicted RBP16.22■□□□□ 0.19
CPSF1-211ENST00000533492 TKTL1P51854 596 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 BCAT1P54687 386 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 EFEMP1Q12805 493 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 CCDC6Q16204 474 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 C10orf76Q5T2E6 689 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 GRAMD4Q6IC98 578 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 TTI2Q6NXR4 508 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 TMEM92Q6UXU6 159 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 TRMT11Q7Z4G4 463 aaKnown RBP16.22■□□□□ 0.19
CPSF1-211ENST00000533492 C11orf74Q86VG3 221 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 PHTF2Q8N3S3 785 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 ZNF513Q8N8E2 541 aaPredicted RBP16.22■□□□□ 0.19
CPSF1-211ENST00000533492 TERB1Q8NA31 727 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 KCNV2Q8TDN2 545 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 CNOT6LQ96LI5 555 aaKnown RBP16.22■□□□□ 0.19
CPSF1-211ENST00000533492 DUSP15Q9H1R2 295 aaPredicted RBP16.22■□□□□ 0.19
CPSF1-211ENST00000533492 BCCIPQ9P287 314 aaKnown RBP eCLIP16.22■□□□□ 0.19
CPSF1-211ENST00000533492 STRIP2Q9ULQ0 834 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 CIZ1Q9ULV3 898 aaPredicted RBP16.22■□□□□ 0.19
CPSF1-211ENST00000533492 CTNND2Q9UQB3 1225 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 ZNF510Q9Y2H8 683 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 PCDHGA5Q9Y5G8 931 aa16.22■□□□□ 0.19
CPSF1-211ENST00000533492 XPO1O14980 1071 aaKnown RBP16.21■□□□□ 0.19
CPSF1-211ENST00000533492 STC2O76061 302 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 ZBED1O96006 694 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 HMBSP08397 361 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 ZNF806P0C7X5 589 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 STX17P56962 302 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 YWHAGP61981 247 aaKnown RBP eCLIP16.21■□□□□ 0.19
CPSF1-211ENST00000533492 PDE4CQ08493 712 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 BST2Q10589 180 aaKnown RBP16.21■□□□□ 0.19
CPSF1-211ENST00000533492 MORC3Q14149 939 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 AASDHQ4L235 1098 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-211ENST00000533492 RAB41Q5JT25 222 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 TMEM270Q6UE05 265 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 RASSF3Q86WH2 238 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 PGBD3Q8N328 593 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 PPM1KQ8N3J5 372 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 IPO9Q96P70 1041 aaKnown RBP16.21■□□□□ 0.19
CPSF1-211ENST00000533492 DCLK3Q9C098 648 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 ZDHHC4Q9NPG8 344 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 MARK1Q9P0L2 795 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 PCDHB4Q9Y5E5 795 aa16.21■□□□□ 0.19
CPSF1-211ENST00000533492 SLC12A8A0AV02 714 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 DCDC2BA2VCK2 349 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 TRIM24O15164 1050 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 PMM2O15305 246 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 P4HA2O15460 535 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 ZBTB24O43167 697 aaPredicted RBP16.2■□□□□ 0.18
CPSF1-211ENST00000533492 CACNG3O60359 315 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 GNA14O95837 355 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 BMP6P22004 513 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 CHKAP35790 457 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 MPLP40238 635 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 CREB5Q02930 508 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 PAK1Q13153 545 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 SF3A2Q15428 464 aaKnown RBP16.2■□□□□ 0.18
CPSF1-211ENST00000533492 PM20D1Q6GTS8 502 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 SDE2Q6IQ49 451 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 FOXR2Q6PJQ5 311 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 Q6ZNB5 142 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 SIX6OS1Q8N1H7 587 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 MDGA1Q8NFP4 955 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 UBA3Q8TBC4 463 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 BHMTQ93088 406 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 ULBP1Q9BZM6 244 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 MARCH2Q9P0N8 246 aa16.2■□□□□ 0.18
CPSF1-211ENST00000533492 MED19A0JLT2 244 aaPredicted RBP16.19■□□□□ 0.18
CPSF1-211ENST00000533492 TULP2O00295 520 aa16.19■□□□□ 0.18
CPSF1-211ENST00000533492 SLC30A4O14863 429 aa16.19■□□□□ 0.18
CPSF1-211ENST00000533492 MAP3K13O43283 966 aa16.19■□□□□ 0.18
CPSF1-211ENST00000533492 GDF9O60383 454 aa16.19■□□□□ 0.18
CPSF1-211ENST00000533492 ADAM23O75077 832 aa16.19■□□□□ 0.18
CPSF1-211ENST00000533492 FGFR1OPO95684 399 aaKnown RBP16.19■□□□□ 0.18
CPSF1-211ENST00000533492 PAEPP09466 180 aa16.19■□□□□ 0.18
CPSF1-211ENST00000533492 HNRNPLP14866 589 aaKnown RBP eCLIP16.19■□□□□ 0.18
CPSF1-211ENST00000533492 DGKGP49619 791 aa16.19■□□□□ 0.18
CPSF1-211ENST00000533492 KCNH2Q12809 1159 aa16.19■□□□□ 0.18
CPSF1-211ENST00000533492 RNF139Q8WU17 664 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms