RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 HTR3CQ8WXA8 447 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 CYP4F12Q9HCS2 524 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 GID8Q9NWU2 228 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 KCNK1O00180 336 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 PBX1P40424 430 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 CELF3Q5SZQ8 465 aaKnown RBP18.09■□□□□ 0.49
PHRF1-205ENST00000533464 TAF2Q6P1X5 1199 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 C10orf88Q9H8K7 445 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 KPNA6O60684 536 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 RPLP2P05387 115 aaKnown RBP18.09■□□□□ 0.49
PHRF1-205ENST00000533464 ZSCAN5DPP0CG00 497 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 GHRP10912 638 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 CPA3P15088 417 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 MAMLD1Q13495 774 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 FLOT2Q14254 428 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 TMEM132BQ14DG7 1078 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 MTFR1Q15390 333 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 IRF2BP2Q7Z5L9 587 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 NT5MQ9NPB1 228 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 PKD2L2Q9NZM6 624 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 MROH7Q68CQ1 1323 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 H7C4K7 107 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 ENDOD1O94919 500 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 PTK2BQ14289 1009 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 BMT2Q1RMZ1 405 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 CLASP2O75122 1294 aaKnown RBP18.09■□□□□ 0.49
PHRF1-205ENST00000533464 ASS1P00966 412 aaKnown RBP18.09■□□□□ 0.49
PHRF1-205ENST00000533464 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 HYIQ5T013 277 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 SNX31Q8N9S9 440 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 PGM2Q96G03 612 aa18.09■□□□□ 0.49
PHRF1-205ENST00000533464 NAF1Q96HR8 494 aaKnown RBP18.09■□□□□ 0.49
PHRF1-205ENST00000533464 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
PHRF1-205ENST00000533464 SAE1Q9UBE0 346 aaPredicted RBP18.09■□□□□ 0.49
PHRF1-205ENST00000533464 APOC4-APOC2K7ER74 178 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 RECQL4O94761 1208 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 APOC2P02655 101 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 CCR1P32246 355 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 SERPINB5P36952 375 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 STX5Q13190 355 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 ZNF662Q6ZS27 426 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 EFL1Q7Z2Z2 1120 aaKnown RBP18.08■□□□□ 0.49
PHRF1-205ENST00000533464 TCP10LQ8TDR4 215 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 MTIF3Q9H2K0 278 aaKnown RBP18.08■□□□□ 0.49
PHRF1-205ENST00000533464 REXO2Q9Y3B8 237 aaKnown RBP18.08■□□□□ 0.49
PHRF1-205ENST00000533464 TPH1P17752 444 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 KCNA3P22001 575 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 ITGB3BPQ13352 177 aaPredicted RBP18.08■□□□□ 0.49
PHRF1-205ENST00000533464 LRRC23Q53EV4 343 aaPredicted RBP18.08■□□□□ 0.49
PHRF1-205ENST00000533464 KCNT2Q6UVM3 1135 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 TUBGCP3Q96CW5 907 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 TMEM120AQ9BXJ8 343 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 COG4Q9H9E3 785 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 CD248Q9HCU0 757 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 VAV3Q9UKW4 847 aa18.08■□□□□ 0.49
PHRF1-205ENST00000533464 FMO1Q01740 532 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 ACAP1Q15027 740 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 ZNF280DQ6N043 979 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 MTG1Q9BT17 334 aaPredicted RBP18.08■□□□□ 0.48
PHRF1-205ENST00000533464 TMEM106CQ9BVX2 250 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 IKZF4Q9H2S9 585 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 STK25O00506 426 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 CYP1A2P05177 515 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 MARCKSL1P49006 195 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 POU6F1Q14863 301 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 PKN2Q16513 984 aaKnown RBP18.08■□□□□ 0.48
PHRF1-205ENST00000533464 UGCGQ16739 394 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 CLEC4FQ8N1N0 589 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 FGFBP2Q9BYJ0 223 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 ADNPQ9H2P0 1102 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 GPRC5DQ9NZD1 345 aa18.08■□□□□ 0.48
PHRF1-205ENST00000533464 CKMP06732 381 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 GRK2P25098 689 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 CAPSQ13938 189 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 RCN1Q15293 331 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 ADCK2Q7Z695 626 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 LZICQ8WZA0 190 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 BATF3Q9NR55 127 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 DRG1Q9Y295 367 aaKnown RBP18.07■□□□□ 0.48
PHRF1-205ENST00000533464 HEATR9A2RTY3 570 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 LRG1P02750 347 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 SERPIND1P05546 499 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 CCDC130P13994 396 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 OXCT1P55809 520 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 RASA2Q15283 850 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 FOXR2Q6PJQ5 311 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 TEX9Q8N6V9 391 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 EIF1ADQ8N9N8 165 aaKnown RBP18.07■□□□□ 0.48
PHRF1-205ENST00000533464 CCDC126Q96EE4 140 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 CCDC134Q9H6E4 229 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 KDELR1P24390 212 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 KIAA0319LQ8IZA0 1049 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 RAB42Q8N4Z0 105 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 TRPM5Q9NZQ8 1165 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 MBL2P11226 248 aaPredicted RBP18.07■□□□□ 0.48
PHRF1-205ENST00000533464 AXLP30530 894 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 PSEN2P49810 448 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 ZACNQ401N2 412 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 ATP13A4Q4VNC1 1196 aa18.07■□□□□ 0.48
PHRF1-205ENST00000533464 SEL1L3Q68CR1 1132 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms