RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 FLT3P36888 993 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 SIX1Q15475 284 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-208ENST00000533123 TRNP1Q6NT89 227 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 LILRA6Q6PI73 481 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 HFE2Q6ZVN8 426 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 SLC26A9Q7LBE3 791 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 TCEAL8Q8IYN2 117 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 CASKIN2Q8WXE0 1202 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 SPATA17Q96L03 361 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 SLITRK6Q9H5Y7 841 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 YIPF1Q9Y548 306 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 PER2O15055 1255 aa19.3■□□□□ 0.68
SMPD1-208ENST00000533123 RARAP10276 462 aa19.3■□□□□ 0.68
SMPD1-208ENST00000533123 CARSP49589 748 aaKnown RBP19.3■□□□□ 0.68
SMPD1-208ENST00000533123 PIGHQ14442 188 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-208ENST00000533123 CLUL1Q15846 466 aa19.3■□□□□ 0.68
SMPD1-208ENST00000533123 EFHC1Q5JVL4 640 aa19.3■□□□□ 0.68
SMPD1-208ENST00000533123 PM20D1Q6GTS8 502 aa19.3■□□□□ 0.68
SMPD1-208ENST00000533123 BHLHA9Q7RTU4 235 aa19.3■□□□□ 0.68
SMPD1-208ENST00000533123 CCDC50Q8IVM0 306 aa19.3■□□□□ 0.68
SMPD1-208ENST00000533123 NIPA2Q8N8Q9 360 aa19.3■□□□□ 0.68
SMPD1-208ENST00000533123 IFT81Q8WYA0 676 aa19.3■□□□□ 0.68
SMPD1-208ENST00000533123 ACSF2Q96CM8 615 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-208ENST00000533123 ALDH1A3P47895 512 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 YWHAZP63104 245 aaKnown RBP19.29■□□□□ 0.68
SMPD1-208ENST00000533123 FAM193AP78312 1265 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 RBM23Q86U06 439 aaKnown RBP19.29■□□□□ 0.68
SMPD1-208ENST00000533123 IFT20Q8IY31 132 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 KATNAL2Q8IYT4 538 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 ARFGAP1Q8N6T3 406 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 AENQ8WTP8 325 aaKnown RBP19.29■□□□□ 0.68
SMPD1-208ENST00000533123 RXFP2Q8WXD0 754 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 MAGED2Q9UNF1 606 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-208ENST00000533123 PI4K2BG5E9Z4 385 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 PHF2O75151 1096 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 GLUD1P00367 558 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 PDGFRAP16234 1089 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 SCNN1AP37088 669 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 TNNT3P45378 269 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-208ENST00000533123 CLCN4P51793 760 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 PLXNA3P51805 1871 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 TWF1Q12792 350 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 MAP9Q49MG5 647 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 TTC27Q6P3X3 843 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 KREMEN2Q8NCW0 462 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 SLC7A14Q8TBB6 771 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 TRIM51Q9BSJ1 452 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 HEMGNQ9BXL5 484 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 INSL5Q9Y5Q6 135 aa19.29■□□□□ 0.68
SMPD1-208ENST00000533123 REV3LO60673 3130 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 C2CD4BA6NLJ0 364 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 SLC38A8A6NNN8 435 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 HSF2BPO75031 334 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 RALAP11233 206 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 TNFRSF8P28908 595 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 PGFP49763 221 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 PDE12Q6L8Q7 609 aaKnown RBP19.28■□□□□ 0.68
SMPD1-208ENST00000533123 DDX42Q86XP3 938 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMPD1-208ENST00000533123 MAGOHBQ96A72 148 aaKnown RBP19.28■□□□□ 0.68
SMPD1-208ENST00000533123 RNF25Q96BH1 459 aaPredicted RBP19.28■□□□□ 0.68
SMPD1-208ENST00000533123 CFAP57Q96MR6 1250 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 FBXO44Q9H4M3 255 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 FBXW11Q9UKB1 542 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 NFU1Q9UMS0 254 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 ZNF638Q14966 1978 aaKnown RBP19.28■□□□□ 0.68
SMPD1-208ENST00000533123 GREB1Q4ZG55 1949 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 YWHAQP27348 245 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 DR1Q01658 176 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 CASP8Q14790 479 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 ADGRD2Q7Z7M1 963 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 DEFB106AQ8N104 65 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 CCDC26Q8TAB7 109 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 FNIP1Q8TF40 1166 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 IL37Q9NZH6 218 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 MAFFQ9ULX9 164 aa19.28■□□□□ 0.68
SMPD1-208ENST00000533123 COLQQ9Y215 455 aaPredicted RBP19.28■□□□□ 0.68
SMPD1-208ENST00000533123 MAP2K7O14733 419 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 CLASP2O75122 1294 aaKnown RBP19.27■□□□□ 0.68
SMPD1-208ENST00000533123 LRCH4O75427 683 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 RTN3O95197 1032 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-208ENST00000533123 FYNP06241 537 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 GPD1P21695 349 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 ZFYVE27Q5T4F4 411 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 HDXQ7Z353 690 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 SCML4Q8N228 414 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 IRGQQ8WZA9 623 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 EDEM1Q92611 657 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 POPDC2Q9HBU9 364 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 LCMT1Q9UIC8 334 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 SCML2Q9UQR0 700 aa19.27■□□□□ 0.68
SMPD1-208ENST00000533123 LTFP02788 710 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 KRT1P04264 644 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 C8AP07357 584 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 ZNF143P52747 638 aaPredicted RBP19.27■□□□□ 0.67
SMPD1-208ENST00000533123 TAF10Q12962 218 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 C15orf59Q2T9L4 293 aaPredicted RBP19.27■□□□□ 0.67
SMPD1-208ENST00000533123 SMTNL2Q2TAL5 461 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 CCDC14Q49A88 953 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 DCAF6Q58WW2 860 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 SH3PXD2AQ5TCZ1 1133 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms