RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 FAM92AA1XBS5 289 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 TRIM24O15164 1050 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 FAM200BP0CF97 657 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 PLA2G4AP47712 749 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 MAP3K7CLP57077 242 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 ARID5AQ03989 594 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 NCOA4Q13772 614 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 SUZ12Q15022 739 aaKnown RBP12.19□□□□□ -0.46
CMTM1-216ENST00000533078 STK38Q15208 465 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 C8orf34Q49A92 452 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 TOGARAM2Q6ZUX3 1019 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 GLRX5Q86SX6 157 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 METTL3Q86U44 580 aaKnown RBP12.19□□□□□ -0.46
CMTM1-216ENST00000533078 NELFCDQ8IXH7 590 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 ZCCHC9Q8N567 271 aaKnown RBP12.19□□□□□ -0.46
CMTM1-216ENST00000533078 IQUBQ8NA54 791 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 CADM4Q8NFZ8 388 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 GOLGA5Q8TBA6 731 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 ZNF507Q8TCN5 953 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 BHMTQ93088 406 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 HPS3Q969F9 1004 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 CDK5RAP1Q96SZ6 601 aaKnown RBP12.19□□□□□ -0.46
CMTM1-216ENST00000533078 ACOX2Q99424 681 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 GPR174Q9BXC1 333 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 VRTNQ9H8Y1 702 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 DNMT3LQ9UJW3 386 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 NME7Q9Y5B8 376 aa12.19□□□□□ -0.46
CMTM1-216ENST00000533078 MORC2Q9Y6X9 1032 aaPredicted RBP12.19□□□□□ -0.46
CMTM1-216ENST00000533078 PRRT4C9JH25 899 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 BCAT2O15382 392 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-216ENST00000533078 STX6O43752 255 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 GJB3O75712 270 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
CMTM1-216ENST00000533078 CYBBP04839 570 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 ZNF883P0CG24 379 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 MAOBP27338 520 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 CHKAP35790 457 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 CDH8P55286 799 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 SLC39A14Q15043 492 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 COL28A1Q2UY09 1125 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 C10orf120Q5SQS8 335 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 ACOT1Q86TX2 421 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 FUKQ8N0W3 1084 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 GALNT15Q8N3T1 639 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 GLIS3Q8NEA6 775 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 SLC2A14Q8TDB8 520 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 DNASE2BQ8WZ79 361 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 PRCCQ92733 491 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-216ENST00000533078 SIPA1Q96FS4 1042 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 NUP58Q9BVL2 599 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 XYLT2Q9H1B5 865 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 ZSCAN16Q9H4T2 348 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-216ENST00000533078 GAREM1Q9H706 876 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 CYLDQ9NQC7 956 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 TM7SF3Q9NS93 570 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-216ENST00000533078 TFIP11Q9UBB9 837 aaKnown RBP12.18□□□□□ -0.46
CMTM1-216ENST00000533078 PCOLCE2Q9UKZ9 415 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 PCDHA5Q9Y5H7 936 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 STON1Q9Y6Q2 735 aa12.18□□□□□ -0.46
CMTM1-216ENST00000533078 A0A087X0B3 334 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 FLRT2O43155 660 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 TGFB1I1O43294 461 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 RALAP11233 206 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 RARGP13631 454 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 CCDC130P13994 396 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 PSEN1P49768 467 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 TEAD4Q15561 434 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 SGSM1Q2NKQ1 1148 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 INAVAQ3KP66 663 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 FUT11Q495W5 492 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 DCAF12L1Q5VU92 463 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 KLHDC10Q6PID8 442 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
CMTM1-216ENST00000533078 UNC93AQ86WB7 457 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 MDM1Q8TC05 714 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 RHBDD1Q8TEB9 315 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 SNX19Q92543 992 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 JAKMIP2Q96AA8 810 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 DHX58Q96C10 678 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 KLF16Q9BXK1 252 aaPredicted RBP12.17□□□□□ -0.46
CMTM1-216ENST00000533078 IMPG2Q9BZV3 1241 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 SLC6A17Q9H1V8 727 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 CSNK1G1Q9HCP0 422 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 KBTBD4Q9NVX7 518 aa12.17□□□□□ -0.46
CMTM1-216ENST00000533078 WSB2Q9NYS7 404 aaPredicted RBP12.17□□□□□ -0.46
CMTM1-216ENST00000533078 CILPO75339 1184 aa12.16□□□□□ -0.46
CMTM1-216ENST00000533078 TBX18O95935 607 aa12.16□□□□□ -0.46
CMTM1-216ENST00000533078 RPN1P04843 607 aaKnown RBP12.16□□□□□ -0.46
CMTM1-216ENST00000533078 ACO1P21399 889 aaKnown RBP12.16□□□□□ -0.46
CMTM1-216ENST00000533078 ADORA2BP29275 332 aa12.16□□□□□ -0.46
CMTM1-216ENST00000533078 HOXD13P35453 343 aa12.16□□□□□ -0.46
CMTM1-216ENST00000533078 AFF3P51826 1226 aaKnown RBP12.16□□□□□ -0.46
CMTM1-216ENST00000533078 COG7P83436 770 aa12.16□□□□□ -0.46
CMTM1-216ENST00000533078 EIF4HQ15056 248 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms