RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 RECQL4O94761 1208 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 NFICP08651 508 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CHI3L1P36222 383 aaPredicted RBP9□□□□□ -0.97
CTNND1-232ENST00000532649 IKBKEQ14164 716 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 C4orf22Q6V702 233 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 SLC13A5Q86YT5 568 aaPredicted RBP9□□□□□ -0.97
CTNND1-232ENST00000532649 CLEC4FQ8N1N0 589 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 IL31RAQ8NI17 732 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 SKA1Q96BD8 255 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 APOL5Q9BWW9 433 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 NSMCE4AQ9NXX6 385 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CAPN1P07384 714 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 GZMAP12544 262 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 PSMA4P25789 261 aaKnown RBP9□□□□□ -0.97
CTNND1-232ENST00000532649 ARFIP2P53365 341 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 PLCL1Q15111 1095 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 PDK2Q15119 407 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 VN1R5Q7Z5H4 357 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 RXFP2Q8WXD0 754 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 ZNF669Q96BR6 464 aaPredicted RBP9□□□□□ -0.97
CTNND1-232ENST00000532649 OLFM3Q96PB7 478 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 PARVBQ9HBI1 364 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 NMRK1Q9NWW6 199 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 SPASTQ9UBP0 616 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 USP18Q9UMW8 372 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 AP4E1Q9UPM8 1137 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 ZNF711Q9Y462 761 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 NFASCO94856 1347 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 E2F8A0AVK6 867 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 ANKRD63C9JTQ0 380 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 MYO1CO00159 1063 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CLEC16AQ2KHT3 1053 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 C3orf62Q6ZUJ4 267 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 DENND5BQ6ZUT9 1274 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 PPIL6Q8IXY8 311 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CAMKK1Q8N5S9 505 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 EDEM1Q92611 657 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 GAD1Q99259 594 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CNPY3Q9BT09 278 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 NLNQ9BYT8 704 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 MYLK2Q9H1R3 596 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 MFSD1Q9H3U5 465 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 RNF19AQ9NV58 838 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 ADGRA2Q96PE1 1338 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 PRMT3O60678 531 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CCDC22O60826 627 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 ENDOD1O94919 500 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CKBP12277 381 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 SERPINB9P50453 376 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 OXCT1P55809 520 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 DEFA1P59665 94 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 DEFA3P59666 94 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 FIGNQ5HY92 759 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CDKAL1Q5VV42 579 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9□□□□□ -0.97
CTNND1-232ENST00000532649 ZNF571Q7Z3V5 609 aaPredicted RBP9□□□□□ -0.97
CTNND1-232ENST00000532649 LINC00523Q86TU6 105 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 ARHGEF19Q8IW93 802 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 RIN2Q8WYP3 895 aaPredicted RBP9□□□□□ -0.97
CTNND1-232ENST00000532649 STAMBPL1Q96FJ0 436 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CAMKK2Q96RR4 588 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 GINS4Q9BRT9 223 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 BBS2Q9BXC9 721 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 KLHL31Q9H511 634 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 CHST12Q9NRB3 414 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 PCMTD2Q9NV79 361 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 SCN3BQ9NY72 215 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 NOP53Q9NZM5 478 aaKnown RBP9□□□□□ -0.97
CTNND1-232ENST00000532649 PSMC3IPQ9P2W1 217 aaPredicted RBP9□□□□□ -0.97
CTNND1-232ENST00000532649 CRLS1Q9UJA2 301 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 FBXL21Q9UKT6 434 aa9□□□□□ -0.97
CTNND1-232ENST00000532649 EIF4E1BA6NMX2 242 aaKnown RBP8.99□□□□□ -0.97
CTNND1-232ENST00000532649 HNRNPCP07910 306 aaKnown RBP eCLIP8.99□□□□□ -0.979e-7■■■■□ 20.8
CTNND1-232ENST00000532649 WEE1P30291 646 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 MAGEA4P43358 317 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 ADIGQ0VDE8 80 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 TFDP3Q5H9I0 405 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 HERC6Q8IVU3 1022 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 BLOC1S5Q8TDH9 187 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 CNBD2Q96M20 576 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 CCDC3Q9BQI4 270 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 EMILIN2Q9BXX0 1053 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 TASP1Q9H6P5 420 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 VPS28Q9UK41 221 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 BIRC5O15392 142 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 STX7O15400 261 aaKnown RBP8.99□□□□□ -0.97
CTNND1-232ENST00000532649 RHOCP08134 193 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 SPRP35270 261 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-232ENST00000532649 HSPA9P38646 679 aaKnown RBP8.99□□□□□ -0.97
CTNND1-232ENST00000532649 GEMP55040 296 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 CDH8P55286 799 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 RAB14P61106 215 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 MRPS6P82932 125 aaKnown RBP8.99□□□□□ -0.97
CTNND1-232ENST00000532649 CDC16Q13042 620 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 PTK7Q13308 1070 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 C6orf10Q5SRN2 563 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 COMMD2Q86X83 199 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 ABRAQ8N0Z2 381 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 MOSPD2Q8NHP6 518 aa8.99□□□□□ -0.97
CTNND1-232ENST00000532649 RIN3Q8TB24 985 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms