RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 C6orf203Q9P0P8 240 aaPredicted RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ZNF112Q9UJU3 913 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 PRRC2BQ5JSZ5 2229 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 TMEM221A6NGB7 291 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SGK1O00141 431 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 OXSR1O95747 527 aaPredicted RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 DLGAP3O95886 979 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ENO2P09104 434 aaPredicted RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 TMEM253P0C7T8 217 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 HSPA1AP0DMV8 641 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 HSPA1BP0DMV9 641 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 UCHL3P15374 230 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 UBA1P22314 1058 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 YWHABP31946 246 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 TTKP33981 857 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ALDH1A3P47895 512 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 LIG4P49917 911 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 BCAP31P51572 246 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SLC5A3P53794 718 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 RCAN1P53805 252 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ARL4CP56559 192 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 GEMIN4P57678 1058 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 PPP4R3CPQ6ZMV5 832 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 CATSPER4Q7RTX7 472 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 CCDC103Q8IW40 242 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ULK2Q8IYT8 1036 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ELMO3Q96BJ8 720 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 DACH2Q96NX9 599 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 NACC1Q96RE7 527 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 C1orf50Q9BV19 199 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 PARVGQ9HBI0 331 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 KMT5AQ9NQR1 393 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SYBUQ9NX95 663 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SNX5Q9Y5X3 404 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 PTCH2Q9Y6C5 1203 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 MYH3P11055 1940 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 GOLGA8QA0A0J9YX86 632 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 GOLGA8OA6NCC3 632 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 KBTBD13C9JR72 458 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 GOLGA8NF8WBI6 632 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 ALOX5P09917 674 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 SNHG28P0DPA3 235 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 CYP2C9P11712 490 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 TNNI1P19237 187 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 FDFT1P37268 417 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 IST1P53990 364 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 CCL23P55773 120 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 TRAF2Q12933 501 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 DMP1Q13316 513 aaPredicted RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 ZNF423Q2M1K9 1284 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 TJAP1Q5JTD0 557 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 PERM1Q5SV97 790 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 METTL21CQ5VZV1 264 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 CCSAPQ6IQ19 270 aaPredicted RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 SLC2A7Q6PXP3 512 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 USP37Q86T82 979 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 ZCCHC7Q8N3Z6 543 aaKnown RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 CLEC4DQ8WXI8 215 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 POMGNT1Q8WZA1 660 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 DACT3Q96B18 629 aaPredicted RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 SHISA4Q96DD7 197 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 BTBD6Q96KE9 485 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 DUSP9Q99956 384 aaKnown RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 IMPG2Q9BZV3 1241 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 HMG20AQ9NP66 347 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 TBC1D22BQ9NU19 505 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 SALL4Q9UJQ4 1053 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 DSEQ9UL01 958 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 AP4B1Q9Y6B7 739 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 ZNF536O15090 1300 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 COL5A3P25940 1745 aaPredicted RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 A0A0A6YYK5 440 aaPredicted RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 H3BRB1 525 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 M0R3G1 203 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 IDH3BO43837 385 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 MAGEC1O60732 1142 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 KRT6AP02538 564 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 KRT6BP04259 564 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 IFNA8P32881 189 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 THPOP40225 353 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 WDR72Q3MJ13 1102 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 TWF2Q6IBS0 349 aaKnown RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 GPAT2Q6NUI2 795 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 ADCK1Q86TW2 530 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 HORMAD1Q86X24 394 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 SLC13A5Q86YT5 568 aaPredicted RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 IRF2BP1Q8IU81 584 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 HNRNPABQ99729 332 aaKnown RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 C7orf25Q9BPX7 421 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 TMEM79Q9BSE2 394 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 NUP85Q9BW27 656 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 HEMGNQ9BXL5 484 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 TUT1Q9H6E5 874 aaKnown RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 MRPL40Q9NQ50 206 aaKnown RBP7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 DNAJB4Q9UDY4 337 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 DNAJC12Q9UKB3 198 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 SPEF1Q9Y4P9 236 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 KDM3AQ9Y4C1 1321 aa7.01□□□□□ -1.29
TGFBR3-209ENST00000532540 SLC26A4O43511 780 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms