RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PTPN18Q99952 460 aa16.26■□□□□ 0.19
PPFIA1-222ENST00000532504 HADHAP40939 763 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 CCDC38Q502W7 563 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 ECHDC2Q86YB7 292 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 ZSWIM2Q8NEG5 633 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 WNT8BQ93098 351 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 MBOAT7Q96N66 472 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 KPNA3O00505 521 aaPredicted RBP16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 ITIH2P19823 946 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 NCF2P19878 526 aaPredicted RBP16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 STIP1P31948 543 aaKnown RBP16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 ARL4DP49703 201 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 OCRLQ01968 901 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 KCNMA1Q12791 1236 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 C3orf20Q8ND61 904 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 PDZD8Q8NEN9 1154 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 HSFY1Q96LI6 401 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 FOPNLQ96NB1 174 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 MINDY3Q9H8M7 445 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 OPLAHO14841 1288 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 EOMESO95936 686 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 HIST1H2AGP0C0S8 130 aaPredicted RBP16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 GFAPP14136 432 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 HIST1H2ADP20671 130 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 NOS2P35228 1153 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 SFSWAPQ12872 951 aaKnown RBP16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 USP10Q14694 798 aaKnown RBP16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 KAT2BQ92831 832 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 HIST1H2AHQ96KK5 128 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 HIST1H2AJQ99878 128 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 H2AFJQ9BTM1 129 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 TMEM161AQ9NX61 479 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 A0A1B0GUA9 196 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 C2orf81A6NN90 581 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 DNM1LO00429 736 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 TAPT1Q6NXT6 567 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 FBXO38Q6PIJ6 1188 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 EPM2AIP1Q7L775 607 aaPredicted RBP16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 ACTL9Q8TC94 416 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 PPP1R2P1Q96PQ5 205 aa16.25■□□□□ 0.19
PPFIA1-222ENST00000532504 SPAG7O75391 227 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 POLBP06746 335 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 POLR2EP19388 210 aaKnown RBP16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 CCDC85BQ15834 202 aaPredicted RBP16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 SNX27Q96L92 541 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 CYTH2Q99418 400 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 KCNK1O00180 336 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 LAMB3Q13751 1172 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 SLC10A6Q3KNW5 377 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 GPR158Q5T848 1215 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 RAB42Q8N4Z0 105 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 SPPL2BQ8TCT7 592 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 UBE2Q2Q8WVN8 375 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 AUTS2Q8WXX7 1259 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 FICDQ9BVA6 458 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 SFMBT1Q9UHJ3 866 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 RFC1P35251 1148 aaPredicted RBP16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 TAF10Q12962 218 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 IMPG1Q17R60 797 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 ATAT1Q5SQI0 421 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 ANGPTL8Q6UXH0 198 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 TMEM192Q8IY95 271 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 LPCAT1Q8NF37 534 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 ING5Q8WYH8 240 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 USP13Q92995 863 aaPredicted RBP16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 FAM136AQ96C01 138 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 VCPIP1Q96JH7 1222 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 MS4A4AQ96JQ5 239 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 TSEN34Q9BSV6 310 aaKnown RBP16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 DRC3Q9H069 523 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 FZD8Q9H461 694 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 OR12D3Q9UGF7 316 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 MYH2Q9UKX2 1941 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 A8MX80 341 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 SLC9A3R1O14745 358 aaPredicted RBP16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 NR1D1P20393 614 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 AGR3Q8TD06 166 aa16.24■□□□□ 0.19
PPFIA1-222ENST00000532504 KITP10721 976 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 FAM71AQ8IYT1 594 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 EXD1Q8NHP7 514 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 SHC3Q92529 594 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 SUSD6Q92537 303 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 ZNF197O14709 1029 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 PAX3P23760 479 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 TKTP29401 623 aaKnown RBP16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 LILRA4P59901 499 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 RSPH1Q8WYR4 309 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 SPATA17Q96L03 361 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 TSSK1BQ9BXA7 367 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 DUSP16Q9BY84 665 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 CPSF2Q9P2I0 782 aaKnown RBP16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 STK38LQ9Y2H1 464 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 MYADML2A6NDP7 307 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 POM121L1PQ3SYA9 428 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 VARS2Q5ST30 1063 aaKnown RBP16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 ATG16L1Q676U5 607 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 C3orf62Q6ZUJ4 267 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms