RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 GPR152Q8TDT2 470 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 CTNNBL1Q8WYA6 563 aaPredicted RBP13.11□□□□□ -0.31
COPB1-208ENST00000532088 GOLGA1Q92805 767 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 FOXJ1Q92949 421 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 RIPOR3Q96MK2 946 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 NECTIN4Q96NY8 510 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 GCNAQ96QF7 691 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 PIDD1Q9HB75 910 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 MRPL47Q9HD33 250 aaKnown RBP13.11□□□□□ -0.31
COPB1-208ENST00000532088 PARVAQ9NVD7 372 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 RRN3Q9NYV6 651 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 TRPM5Q9NZQ8 1165 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 DNMT3BQ9UBC3 853 aaKnown RBP13.11□□□□□ -0.31
COPB1-208ENST00000532088 LCMT1Q9UIC8 334 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 COG5Q9UP83 839 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 A0A0A6YYK5 440 aaPredicted RBP13.1□□□□□ -0.31
COPB1-208ENST00000532088 ZNF840PA6NDX5 716 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 BTNL10A8MVZ5 291 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 TMCO5BA8MYB1 307 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 CYP1A2P05177 515 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 MTHFRP42898 656 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 MAGEA1P43355 309 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 VAV2P52735 878 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 YWHAGP61981 247 aaKnown RBP eCLIP13.1□□□□□ -0.31
COPB1-208ENST00000532088 MTF1Q14872 753 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 PRSS36Q5K4E3 855 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 ATAT1Q5SQI0 421 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 RARS2Q5T160 578 aaKnown RBP13.1□□□□□ -0.31
COPB1-208ENST00000532088 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 RHOT2Q8IXI1 618 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 SMRP1Q8NCR6 262 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 STKLD1Q8NE28 680 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 ZNF653Q96CK0 615 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 SLC2A13Q96QE2 648 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 OCSTAMPQ9BR26 566 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 CORO1BQ9BR76 489 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 ZMYND15Q9H091 742 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 UBE2ZQ9H832 354 aaPredicted RBP13.1□□□□□ -0.31
COPB1-208ENST00000532088 POPDC2Q9HBU9 364 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 ZNF334Q9HCZ1 680 aaPredicted RBP13.1□□□□□ -0.31
COPB1-208ENST00000532088 WDR6Q9NNW5 1121 aaKnown RBP13.1□□□□□ -0.31
COPB1-208ENST00000532088 ABCC13Q9NSE7 274 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 OLA1Q9NTK5 396 aaKnown RBP13.1□□□□□ -0.31
COPB1-208ENST00000532088 UVRAGQ9P2Y5 699 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 TJP2Q9UDY2 1190 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
COPB1-208ENST00000532088 MAGED2Q9UNF1 606 aaPredicted RBP13.1□□□□□ -0.31
COPB1-208ENST00000532088 PCDHA13Q9Y5I0 950 aa13.1□□□□□ -0.31
COPB1-208ENST00000532088 ZNF638Q14966 1978 aaKnown RBP13.09□□□□□ -0.31
COPB1-208ENST00000532088 SIGLEC16A6NMB1 481 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 PJA2O43164 708 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 TADA3O75528 432 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 DAB1O75553 588 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 MTA2O94776 668 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 LTFP02788 710 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 RALAP11233 206 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 RRM1P23921 792 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 GABRR2P28476 465 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 WEE1P30291 646 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 YWHAZP63104 245 aaKnown RBP13.09□□□□□ -0.31
COPB1-208ENST00000532088 MAMLD1Q13495 774 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 FAM102AQ5T9C2 384 aaPredicted RBP13.09□□□□□ -0.31
COPB1-208ENST00000532088 DNAJC24Q6P3W2 148 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 TMC5Q6UXY8 1006 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 GAREM2Q75VX8 874 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 GRASPQ7Z6J2 395 aaPredicted RBP13.09□□□□□ -0.31
COPB1-208ENST00000532088 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 TMEM150AQ86TG1 271 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
COPB1-208ENST00000532088 FNIP1Q8TF40 1166 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 MRPS31Q92665 395 aaKnown RBP13.09□□□□□ -0.31
COPB1-208ENST00000532088 SELENOOQ9BVL4 669 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 THAP2Q9H0W7 228 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 KCNF1Q9H3M0 494 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 GMIPQ9P107 970 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 TMEM59LQ9UK28 342 aa13.09□□□□□ -0.31
COPB1-208ENST00000532088 REXO2Q9Y3B8 237 aaKnown RBP13.09□□□□□ -0.31
COPB1-208ENST00000532088 A0A1W2PQH9 124 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 YJEFN3A6XGL0 299 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 E7ENQ6 273 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 OLFM2O95897 454 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 OAS1P00973 400 aaKnown RBP13.08□□□□□ -0.32
COPB1-208ENST00000532088 CCDC175P0C221 793 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 KRT3P12035 628 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 ABCB4P21439 1286 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 NOS2P35228 1153 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 MATKP42679 507 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 HADHBP55084 474 aaKnown RBP13.08□□□□□ -0.32
COPB1-208ENST00000532088 DLX2Q07687 328 aaPredicted RBP13.08□□□□□ -0.32
COPB1-208ENST00000532088 IFRD2Q12894 506 aaPredicted RBP13.08□□□□□ -0.32
COPB1-208ENST00000532088 SMAD4Q13485 552 aaKnown RBP13.08□□□□□ -0.32
COPB1-208ENST00000532088 ARHGAP15Q53QZ3 475 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 C4orf48Q5BLP8 95 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 HECTD3Q5T447 861 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 BSPRYQ5W0U4 402 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 BTBD8Q5XKL5 378 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 MSANTD2Q6P1R3 559 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 SHKBP1Q8TBC3 707 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 CLEC4CQ8WTT0 213 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms