RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 TDP1Q9NUW8 608 aa19.58■□□□□ 0.72
PUF60-218ENST00000531995 POLR3BQ9NW08 1133 aaPredicted RBP19.58■□□□□ 0.72
PUF60-218ENST00000531995 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.57■□□□□ 0.72
PUF60-218ENST00000531995 XPO1O14980 1071 aaKnown RBP19.57■□□□□ 0.72
PUF60-218ENST00000531995 THAP12O43422 761 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 GFPT2O94808 682 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 CYP11B1P15538 503 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 SDHBP21912 280 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 GPD2P43304 727 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 BCAT1P54687 386 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 PTK2Q05397 1052 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 BST2Q10589 180 aaKnown RBP19.57■□□□□ 0.72
PUF60-218ENST00000531995 RUNX3Q13761 415 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 FIGNQ5HY92 759 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 RAB41Q5JT25 222 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 NOP9Q86U38 636 aaKnown RBP19.57■□□□□ 0.72
PUF60-218ENST00000531995 PIGZQ86VD9 579 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 FAM160A2Q8N612 972 aaPredicted RBP19.57■□□□□ 0.72
PUF60-218ENST00000531995 KIF9Q9HAQ2 790 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 COMMD8Q9NX08 183 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 CYTH4Q9UIA0 394 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 USP3Q9Y6I4 520 aa19.57■□□□□ 0.72
PUF60-218ENST00000531995 SDK1Q7Z5N4 2213 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 EGFP01133 1207 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 CHRNB2P17787 502 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 STAT1P42224 750 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 RPL34P49207 117 aaKnown RBP19.56■□□□□ 0.72
PUF60-218ENST00000531995 KIF11P52732 1056 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 TAF10Q12962 218 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 MTF1Q14872 753 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 TMEM196Q5HYL7 178 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 PMF1Q6P1K2 205 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 CC2D1AQ6P1N0 951 aaPredicted RBP19.56■□□□□ 0.72
PUF60-218ENST00000531995 PRR23CQ6ZRP0 262 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 MON1AQ86VX9 555 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 WDR5BQ86VZ2 330 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 SLC22A12Q96S37 553 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 RTKNQ9BST9 563 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 EDEM3Q9BZQ6 932 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 HESX1Q9UBX0 185 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 ZMYM5Q9UJ78 669 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 NOCTQ9UK39 431 aaKnown RBP19.56■□□□□ 0.72
PUF60-218ENST00000531995 PCDHGC3Q9UN70 934 aa19.56■□□□□ 0.72
PUF60-218ENST00000531995 EPG5Q9HCE0 2579 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 M0QYV0 167 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 GDF9O60383 454 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 RNF40O75150 1001 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 RTN3O95197 1032 aaPredicted RBP19.55■□□□□ 0.72
PUF60-218ENST00000531995 CKMP06732 381 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 KCNA4P22459 653 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 YWHAQP27348 245 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 PLA2G4AP47712 749 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 BPIFB4P59827 614 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 GRSF1Q12849 480 aaKnown RBP eCLIP19.55■□□□□ 0.72
PUF60-218ENST00000531995 CCDC6Q16204 474 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 MEA1Q16626 185 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 E4F1Q66K89 784 aaPredicted RBP19.55■□□□□ 0.72
PUF60-218ENST00000531995 IRF2BP2Q7Z5L9 587 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 SYNPOQ8N3V7 929 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 EPS8L1Q8TE68 723 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 KCTD13Q8WZ19 329 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 SPAG5Q96R06 1193 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 ANP32EQ9BTT0 268 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 UXTQ9UBK9 157 aaPredicted RBP19.55■□□□□ 0.72
PUF60-218ENST00000531995 CHORDC1Q9UHD1 332 aaPredicted RBP19.55■□□□□ 0.72
PUF60-218ENST00000531995 WNT6Q9Y6F9 365 aa19.55■□□□□ 0.72
PUF60-218ENST00000531995 ITIH6Q6UXX5 1313 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 ZNF840PA6NDX5 716 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 CBFA2T2O43439 604 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 MED7O43513 233 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 ZDHHC11BP0C7U3 371 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 SETSIPP0DME0 302 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 CNR2P34972 360 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 IFRD2Q12894 506 aaPredicted RBP19.54■□□□□ 0.72
PUF60-218ENST00000531995 USP4Q13107 963 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 ZNF77Q15935 545 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 BHLHA9Q7RTU4 235 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 CACNA2D4Q7Z3S7 1137 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 OLIG1Q8TAK6 271 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 NETO1Q8TDF5 533 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 SLC20A1Q8WUM9 679 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 HHIPQ96QV1 700 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 LHX5Q9H2C1 402 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 FBRSL1Q9HCM7 1045 aaKnown RBP19.54■□□□□ 0.72
PUF60-218ENST00000531995 MYO6Q9UM54 1294 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 SCML2Q9UQR0 700 aa19.54■□□□□ 0.72
PUF60-218ENST00000531995 TPRP12270 2363 aaKnown RBP19.54■□□□□ 0.72
PUF60-218ENST00000531995 ACACBO00763 2458 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 TRAV19A0A0A6YYK7 116 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 C2orf78A6NCI8 922 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 LRRC53A6NM62 1247 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 LRP3O75074 770 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 GYPCP04921 128 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 RGS7P49802 495 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 ZNF268Q14587 947 aaPredicted RBP19.53■□□□□ 0.72
PUF60-218ENST00000531995 CSRP2Q16527 193 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 SNX30Q5VWJ9 437 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 PM20D1Q6GTS8 502 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 SCD5Q86SK9 330 aa19.53■□□□□ 0.72
PUF60-218ENST00000531995 VSTM4Q8IW00 320 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms