RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 MTBPQ96DY7 904 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 GEMIN8Q9NWZ8 242 aaKnown RBP17.48■□□□□ 0.39
VPS26B-206ENST00000531741 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.48■□□□□ 0.39
VPS26B-206ENST00000531741 MTO1Q9Y2Z2 717 aaKnown RBP17.48■□□□□ 0.39
VPS26B-206ENST00000531741 NME7Q9Y5B8 376 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 SLC15A5A6NIM6 579 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 APOEP02649 317 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 PTPN4P29074 926 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 HOXA11P31270 313 aaPredicted RBP17.48■□□□□ 0.39
VPS26B-206ENST00000531741 L1CAMP32004 1257 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 ELF1P32519 619 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 SERPINB4P48594 390 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 ACCSLQ4AC99 568 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 SLC27A1Q6PCB7 646 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 CYS1Q717R9 158 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 MTDHQ86UE4 582 aaKnown RBP17.48■□□□□ 0.39
VPS26B-206ENST00000531741 TRIM42Q8IWZ5 723 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 VPS52Q8N1B4 723 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 ZC3H15Q8WU90 426 aaKnown RBP17.48■□□□□ 0.39
VPS26B-206ENST00000531741 CFAP36Q96G28 342 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 ZMAT2Q96NC0 199 aaKnown RBP17.48■□□□□ 0.39
VPS26B-206ENST00000531741 FAM111AQ96PZ2 611 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 TBC1D10AQ9BXI6 508 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 ADAMTS10Q9H324 1103 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 C12orf65Q9H3J6 166 aaKnown RBP17.48■□□□□ 0.39
VPS26B-206ENST00000531741 PRDM16Q9HAZ2 1276 aa17.48■□□□□ 0.39
VPS26B-206ENST00000531741 TRIM49D1C9J1S8 452 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 COPEO14579 308 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 STRNO43815 780 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 NPTXRO95502 500 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 APRTP07741 180 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 ADCYAP1R1P41586 468 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 BST2Q10589 180 aaKnown RBP17.47■□□□□ 0.39
VPS26B-206ENST00000531741 ALKAL1Q6UXT8 129 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 CRYBG2Q8N1P7 616 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 ANKRD52Q8NB46 1076 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 RFWD2Q8NHY2 731 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 ANKRD27Q96NW4 1050 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 SRPK1Q96SB4 655 aaKnown RBP17.47■□□□□ 0.39
VPS26B-206ENST00000531741 FAM49BQ9NUQ9 324 aa17.47■□□□□ 0.39
VPS26B-206ENST00000531741 CBX6O95503 412 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 DLDP09622 509 aaKnown RBP17.46■□□□□ 0.39
VPS26B-206ENST00000531741 BCAT1P54687 386 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 SOWAHAQ2M3V2 549 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 FAM91A1Q658Y4 838 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 ZNF534Q76KX8 674 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 PPM1NQ8N819 430 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 CCDC110Q8TBZ0 833 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 SIGLEC10Q96LC7 697 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 QKIQ96PU8 341 aaKnown RBP eCLIP17.46■□□□□ 0.394e-8■■■■■ 33.1
VPS26B-206ENST00000531741 KCNK13Q9HB14 408 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 XAB2Q9HCS7 855 aaKnown RBP17.46■□□□□ 0.39
VPS26B-206ENST00000531741 SNTG2Q9NY99 539 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 RRN3P2A6NIE6 340 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 A6NJR5 290 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 E7ENQ6 273 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 PPEF2O14830 753 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 GJA5P36382 358 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 ACADSBP45954 432 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 ARFIP2P53365 341 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 DUSP28Q4G0W2 176 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 WASHC2DQ5SRD0 308 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 LDLRAD1Q5T700 205 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 UNC5AQ6ZN44 842 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 FAM13CQ8NE31 585 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 GSDMBQ8TAX9 411 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 NSMCE1Q8WV22 266 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 SKA1Q96BD8 255 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 RSRC1Q96IZ7 334 aaKnown RBP17.46■□□□□ 0.39
VPS26B-206ENST00000531741 TSPAN18Q96SJ8 248 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 EBNA1BP2Q99848 306 aaKnown RBP17.46■□□□□ 0.39
VPS26B-206ENST00000531741 GCOM2Q9BZD3 368 aaPredicted RBP17.46■□□□□ 0.39
VPS26B-206ENST00000531741 IQCGQ9H095 443 aaKnown RBP17.46■□□□□ 0.39
VPS26B-206ENST00000531741 MTMR10Q9NXD2 777 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 DCTN4Q9UJW0 460 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 SLC45A1Q9Y2W3 748 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 PLLPQ9Y342 182 aa17.46■□□□□ 0.39
VPS26B-206ENST00000531741 KAT6AQ92794 2004 aa17.46■□□□□ 0.38
VPS26B-206ENST00000531741 PDCD11Q14690 1871 aaKnown RBP17.45■□□□□ 0.38
VPS26B-206ENST00000531741 FAM159BA6NKW6 160 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 CXorf49A8MYA2 514 aaPredicted RBP17.45■□□□□ 0.38
VPS26B-206ENST00000531741 KRT38O76015 456 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 SNAI1O95863 264 aaPredicted RBP17.45■□□□□ 0.38
VPS26B-206ENST00000531741 MMP3P08254 477 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 GCLCP48506 637 aaPredicted RBP17.45■□□□□ 0.38
VPS26B-206ENST00000531741 CDK16Q00536 496 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 OVGP1Q12889 678 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 SEMA5AQ13591 1074 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 PPP6R3Q5H9R7 873 aaPredicted RBP17.45■□□□□ 0.38
VPS26B-206ENST00000531741 SYCP2LQ5T4T6 812 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 C9orf57Q5W0N0 161 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 NOTUMQ6P988 496 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 ZNF449Q6P9G9 518 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 USP50Q70EL3 339 aaPredicted RBP17.45■□□□□ 0.38
VPS26B-206ENST00000531741 CTAGE3PQ8IX95 158 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 OR6B3Q8NGW1 331 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 CFAP61Q8NHU2 1237 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 RAB3IL1Q8TBN0 382 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 B3GNT5Q9BYG0 378 aa17.45■□□□□ 0.38
VPS26B-206ENST00000531741 CXCL16Q9H2A7 254 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms