RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 SMYD3Q9H7B4 428 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 GMIPQ9P107 970 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 ITPR1Q14643 2758 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 ARHGAP33O14559 1287 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 TRIM24O15164 1050 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 ZBTB24O43167 697 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-212ENST00000531625 GREM1O60565 184 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 SMC2O95347 1197 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 CDH8P55286 799 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 CAMK4Q16566 473 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 GRAMD4Q6IC98 578 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 ELOA2Q8IYF1 753 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-212ENST00000531625 MINDY1Q8N5J2 469 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 ERCC4Q92889 916 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-212ENST00000531625 NACA2Q9H009 215 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 FSCN3Q9NQT6 498 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 DNAAF2Q9NVR5 837 aaKnown RBP20.13■□□□□ 0.81
UBXN1-212ENST00000531625 ACACAQ13085 2346 aa20.13■□□□□ 0.81
UBXN1-212ENST00000531625 CACNG3O60359 315 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 TLR5O60602 858 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 PHACTR2O75167 634 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 AP1G2O75843 785 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 MBD3O95983 291 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 SYPP08247 313 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 AP3M2P53677 418 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 BMT2Q1RMZ1 405 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 ZNF423Q2M1K9 1284 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 ZNF699Q32M78 642 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 ZNF667Q5HYK9 610 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 EGFLAMQ63HQ2 1017 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 SDE2Q6IQ49 451 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 SLC41A1Q8IVJ1 513 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 NELFCDQ8IXH7 590 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 FUKQ8N0W3 1084 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 DEFB119Q8N690 84 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 IPO4Q8TEX9 1081 aaKnown RBP20.12■□□□□ 0.81
UBXN1-212ENST00000531625 SMARCE1Q969G3 411 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 XPO6Q96QU8 1125 aaKnown RBP20.12■□□□□ 0.81
UBXN1-212ENST00000531625 GABRG3Q99928 467 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 CLSTN2Q9H4D0 955 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 FBXO44Q9H4M3 255 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 DNAJC17Q9NVM6 304 aaKnown RBP20.12■□□□□ 0.81
UBXN1-212ENST00000531625 MARK1Q9P0L2 795 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 WDR35Q9P2L0 1181 aa20.12■□□□□ 0.81
UBXN1-212ENST00000531625 IRF1P10914 325 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 CD59P13987 128 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 NDUFV2P19404 249 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 WASP42768 502 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 CLDN10P78369 228 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 SLC14A1Q13336 389 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 COL9A2Q14055 689 aaPredicted RBP20.11■□□□□ 0.81
UBXN1-212ENST00000531625 LRSAM1Q6UWE0 723 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 CHPFQ8IZ52 775 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 ZMIZ2Q8NF64 920 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 ZNF419Q96HQ0 510 aaPredicted RBP20.11■□□□□ 0.81
UBXN1-212ENST00000531625 ACOX2Q99424 681 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 SMOQ99835 787 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 KLF16Q9BXK1 252 aaPredicted RBP20.11■□□□□ 0.81
UBXN1-212ENST00000531625 CSNK1G1Q9HCP0 422 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 SLC39A2Q9NP94 309 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 KRT82Q9NSB4 513 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 PCDHA5Q9Y5H7 936 aa20.11■□□□□ 0.81
UBXN1-212ENST00000531625 KNL1Q8NG31 2342 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 HOXB3P14651 431 aaPredicted RBP20.1■□□□□ 0.81
UBXN1-212ENST00000531625 TYRP14679 529 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 PGFP49763 221 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 FAM193AP78312 1265 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 BIRC3Q13489 604 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 NCOA4Q13772 614 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 RAB44Q7Z6P3 723 aaPredicted RBP20.1■□□□□ 0.81
UBXN1-212ENST00000531625 ACOT1Q86TX2 421 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 CRYBG2Q8N1P7 616 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 TRIML1Q8N9V2 468 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 PLEKHO2Q8TD55 490 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 PARD3BQ8TEW8 1205 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 HSPA12BQ96MM6 686 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 BBS2Q9BXC9 721 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 SDCBP2Q9H190 292 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 NUP62CLQ9H1M0 184 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 FAM124BQ9H5Z6 455 aaPredicted RBP20.1■□□□□ 0.81
UBXN1-212ENST00000531625 CYLDQ9NQC7 956 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 TLR8Q9NR97 1041 aaKnown RBP20.1■□□□□ 0.81
UBXN1-212ENST00000531625 RMND1Q9NWS8 449 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 CYP8B1Q9UNU6 501 aa20.1■□□□□ 0.81
UBXN1-212ENST00000531625 MYH10P35580 1976 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 PRRT4C9JH25 899 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 NEDD8-MDP1E9PL57 170 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 GFRA2O00451 464 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 EXOC3O60645 756 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 GJB3O75712 270 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 RHOBTB3O94955 611 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 C4BPAP04003 597 aaKnown RBP20.09■□□□□ 0.81
UBXN1-212ENST00000531625 PTMSP20962 102 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 CASP4P49662 377 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 RING1Q06587 406 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 GOLGA8FQ08AF8 430 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 GOLGA8DPQ0D2H9 430 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 KNOP1Q1ED39 458 aaKnown RBP20.09■□□□□ 0.81
UBXN1-212ENST00000531625 CHCHD4Q8N4Q1 142 aa20.09■□□□□ 0.81
UBXN1-212ENST00000531625 SUSD2Q9UGT4 822 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms