RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 PLEKHA2Q9HB19 425 aa7.15□□□□□ -1.26
CAPRIN1-208ENST00000530008 BAG5Q9UL15 447 aa7.15□□□□□ -1.26
CAPRIN1-208ENST00000530008 DRG1Q9Y295 367 aaKnown RBP7.15□□□□□ -1.26
CAPRIN1-208ENST00000530008 PCDHB7Q9Y5E2 793 aa7.15□□□□□ -1.26
CAPRIN1-208ENST00000530008 LOC105369274A0A096LPK9 316 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 LOC102723532A0A0G2JNH3 316 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 PI4KAP2A4QPH2 592 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 SEPT4O43236 478 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 RPS6KA4O75676 772 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 CD19P15391 556 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 DRD1P21728 446 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 PGM1P36871 562 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 CCR9P51686 369 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 DRG2P55039 364 aaKnown RBP7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 DCTN1Q14203 1278 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 ERV3-1Q14264 604 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 MEA1Q16626 185 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 GEN1Q17RS7 908 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 FAM205BPQ63HN1 556 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 B3GNTL1Q67FW5 361 aaPredicted RBP7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 CCDC144NLQ6NUI1 221 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 LRRC8DQ7L1W4 858 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 KRT27Q7Z3Y8 459 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 R3HCC1LQ7Z5L2 792 aaKnown RBP7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 SGMS1Q86VZ5 419 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 ARMC8Q8IUR7 673 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 OR4N4Q8N0Y3 316 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 OR8H2Q8N162 312 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 TMEM132CQ8N3T6 1108 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 FSIP1Q8NA03 581 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 LINS1Q8NG48 757 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 CENPOQ9BU64 300 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 SERHL2Q9H4I8 314 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 SMYD2Q9NRG4 433 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 FPGT-TNNI3KV9GXZ4 949 aa7.14□□□□□ -1.27
CAPRIN1-208ENST00000530008 M0QYT0 321 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 FOXS1O43638 330 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 NUAK1O60285 661 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 HEXIM1O94992 359 aaKnown RBP7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 CFIP05156 583 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 TGM1P22735 817 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 CHMP24386 653 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 THBS4P35443 961 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 POLD2P49005 469 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 FAM3BP58499 235 aaPredicted RBP7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 CXADRP78310 365 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 CYP2A13Q16696 494 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 NAA35Q5VZE5 725 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 FAM90A2PQ658T7 463 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 Q6ZRM9 215 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 GDF7Q7Z4P5 450 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 GALNT4Q8N4A0 578 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 ANKRD44Q8N8A2 993 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 SUPT20HQ8NEM7 779 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 RBM17Q96I25 401 aaKnown RBP7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 APOPT1Q96IL0 206 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 SLC38A3Q99624 504 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 NUDT16L1Q9BRJ7 211 aaKnown RBP7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 TRIM36Q9NQ86 728 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 KRT84Q9NSB2 600 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 FBXO28Q9NVF7 368 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 TRPM5Q9NZQ8 1165 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 PPP4R1LQ9P1A2 415 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 NKX1-2Q9UD57 310 aaPredicted RBP7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 GPR34Q9UPC5 381 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 TTLL3Q9Y4R7 772 aa7.13□□□□□ -1.27
CAPRIN1-208ENST00000530008 TDRD9Q8NDG6 1382 aaKnown RBP7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 PPM1DO15297 605 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 TMCC2O75069 709 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 VNN1O95497 513 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 TMEM225BP0DP42 221 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 GATA3P23771 443 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 RAD52P43351 418 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 EIF4A1P60842 406 aaKnown RBP7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 RNASELQ05823 741 aaKnown RBP7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 AAK1Q2M2I8 961 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 LRRC24Q50LG9 513 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 LIPMQ5VYY2 423 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 B4GALNT4Q76KP1 1039 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 BHLHE22Q8NFJ8 381 aaPredicted RBP7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 SLC2A12Q8TD20 617 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 OVCA2Q8WZ82 227 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 NACC2Q96BF6 587 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 RNF31Q96EP0 1072 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 TIGD1Q96MW7 591 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 FUZQ9BT04 418 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 NRDE2Q9H7Z3 1164 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 IL21RQ9HBE5 538 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 NSMCE4AQ9NXX6 385 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 RCE1Q9Y256 329 aa7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 UBE2J1Q9Y385 318 aaPredicted RBP7.12□□□□□ -1.27
CAPRIN1-208ENST00000530008 NPEPPSL1A6NEC2 478 aa7.11□□□□□ -1.27
CAPRIN1-208ENST00000530008 M0QZQ0 153 aa7.11□□□□□ -1.27
CAPRIN1-208ENST00000530008 PEX12O00623 359 aa7.11□□□□□ -1.27
CAPRIN1-208ENST00000530008 KIAA0355O15063 1070 aa7.11□□□□□ -1.27
CAPRIN1-208ENST00000530008 TRIM24O15164 1050 aa7.11□□□□□ -1.27
CAPRIN1-208ENST00000530008 DOK2O60496 412 aa7.11□□□□□ -1.27
CAPRIN1-208ENST00000530008 RECQL4O94761 1208 aa7.11□□□□□ -1.27
CAPRIN1-208ENST00000530008 ERBB2P04626 1255 aa7.11□□□□□ -1.27
CAPRIN1-208ENST00000530008 RRM1P23921 792 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms