RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 AAASQ9NRG9 546 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 OR51B4Q9Y5P0 310 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 CDY1Q9Y6F8 540 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 AKR1B10O60218 316 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 TADA2AO75478 443 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 AP1G2O75843 785 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 SYN1P17600 705 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 BDNFP23560 247 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 RABGGTBP53611 331 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 ADAM15Q13444 863 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 PRKD1Q15139 912 aaPredicted RBP8.2□□□□□ -1.1
SORL1-207ENST00000528339 CTXN3Q4LDR2 81 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 RHBDF2Q6PJF5 856 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 EFHBQ8N7U6 833 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 FRMD8P1Q9BZ68 369 aaPredicted RBP8.2□□□□□ -1.1
SORL1-207ENST00000528339 ULBP1Q9BZM6 244 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 PDFQ9HBH1 243 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 INPP5FQ9Y2H2 1132 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 RAD54BQ9Y620 910 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 PYGMP11217 842 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 ALDH7A1P49419 539 aaKnown RBP8.2□□□□□ -1.1
SORL1-207ENST00000528339 MAP3K7CLP57077 242 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 WHAMMP3Q1A5X7 153 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 ZNF394Q53GI3 561 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 BRMS1LQ5PSV4 323 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 SCUBE3Q8IX30 993 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 VPS52Q8N1B4 723 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 ALG14Q96F25 216 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 MCEEQ96PE7 176 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 NAPGQ99747 312 aaPredicted RBP8.2□□□□□ -1.1
SORL1-207ENST00000528339 PLEKHA4Q9H4M7 779 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 NR2E1Q9Y466 385 aa8.2□□□□□ -1.1
SORL1-207ENST00000528339 GRXCR1A8MXD5 290 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 NT5C1B-RDH14C9J2C7 533 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 SART1O43290 800 aaKnown RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 CA3P07451 260 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 TKTL1P51854 596 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 CHMP4BP1P59074 171 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 YWHAZP63104 245 aaKnown RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 SPA17Q15506 151 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 RELL1Q8IUW5 271 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 RXFP2Q8WXD0 754 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 FBXO44Q9H4M3 255 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 ABCC13Q9NSE7 274 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 MARK1Q9P0L2 795 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 LTFP02788 710 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 MIPP30301 263 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 YWHAGP61981 247 aaKnown RBP eCLIP8.19□□□□□ -1.1
SORL1-207ENST00000528339 HYAL1Q12794 435 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 MTA1Q13330 715 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 MSLNQ13421 630 aaPredicted RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 PTPROQ16827 1216 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 PAN2Q504Q3 1202 aaKnown RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 TTC27Q6P3X3 843 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 BBS12Q6ZW61 710 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 TAC4Q86UU9 113 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 ARHGAP12Q8IWW6 846 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 CPXM2Q8N436 756 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 CCDC185Q8N715 623 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 PRELID2Q8N945 189 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 PDZD8Q8NEN9 1154 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 DQX1Q8TE96 717 aaKnown RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 CTNNBL1Q8WYA6 563 aaPredicted RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 CASP10Q92851 521 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 MYEOVQ96EZ4 313 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 MMS19Q96T76 1030 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 TRIM62Q9BVG3 475 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 PHACTR1Q9C0D0 580 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 ANKZF1Q9H8Y5 726 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.19□□□□□ -1.1
SORL1-207ENST00000528339 PCDHB12Q9Y5F1 795 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 KIAA0100Q14667 2235 aaKnown RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 C5orf42Q9H799 3197 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 MYCP01106 439 aaPredicted RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 MYCNP04198 464 aaPredicted RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 KRT3P12035 628 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 KDELR1P24390 212 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 DDX6P26196 483 aaKnown RBP eCLIP8.19□□□□□ -1.1
SORL1-207ENST00000528339 MAGEA3P43357 314 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 GUCY2DQ02846 1103 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 PLD1Q13393 1074 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 SLC14A2Q15849 920 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 CA9Q16790 459 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 C2CD6Q53TS8 623 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.19□□□□□ -1.1
SORL1-207ENST00000528339 POF1BQ8WVV4 589 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 CFAP57Q96MR6 1250 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 KCTD15Q96SI1 283 aaPredicted RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 PCDH18Q9HCL0 1135 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 OBP2AQ9NY56 170 aa8.19□□□□□ -1.1
SORL1-207ENST00000528339 DDX56Q9NY93 547 aaKnown RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 ZMYND8Q9ULU4 1186 aaPredicted RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 HBS1LQ9Y450 684 aaKnown RBP8.19□□□□□ -1.1
SORL1-207ENST00000528339 A0A0A0MRY4 1105 aa8.18□□□□□ -1.1
SORL1-207ENST00000528339 TCRBV7S2A1N4TA0A589 114 aa8.18□□□□□ -1.1
SORL1-207ENST00000528339 ANHXE9PGG2 379 aa8.18□□□□□ -1.1
SORL1-207ENST00000528339 SOX1O00570 391 aaPredicted RBP8.18□□□□□ -1.1
SORL1-207ENST00000528339 TCP1P17987 556 aaKnown RBP8.18□□□□□ -1.1
SORL1-207ENST00000528339 RDXP35241 583 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms