RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 TBC1D3BA6NDS4 549 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 PRR5-ARHGAP8B1AHC4 643 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 K7EQS6 105 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 CYP26A1O43174 497 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 MED7O43513 233 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 HRO43593 1189 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 KAT7O95251 611 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 TBX18O95935 607 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 TKTL1P51854 596 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 DGKEP52429 567 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 MFAP3P55082 362 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 STX17P56962 302 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 YWHAGP61981 247 aaKnown RBP eCLIP10.08□□□□□ -0.8
CHD7-208ENST00000528280 ARHGAP8P85298 464 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 PDE4CQ08493 712 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 BYSLQ13895 437 aaKnown RBP10.08□□□□□ -0.8
CHD7-208ENST00000528280 DMC1Q14565 340 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 GOLGA7BQ2TAP0 167 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 ANO4Q32M45 955 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 EOGTQ5NDL2 527 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 LY6G5CQ5SRR4 150 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 HEATR6Q6AI08 1181 aaKnown RBP10.08□□□□□ -0.8
CHD7-208ENST00000528280 SDE2Q6IQ49 451 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 TMEM270Q6UE05 265 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 PRR23BQ6ZRT6 265 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 RSRC2Q7L4I2 434 aaKnown RBP10.08□□□□□ -0.8
CHD7-208ENST00000528280 GPRIN1Q7Z2K8 1008 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 CREBRFQ8IUR6 639 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 BBS7Q8IWZ6 715 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 SIX6OS1Q8N1H7 587 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 LMO3Q8TAP4 145 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 USP33Q8TEY7 942 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 RNF139Q8WU17 664 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 GAB3Q8WWW8 586 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 IRGQQ8WZA9 623 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 GOLGA1Q92805 767 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 HSFY1Q96LI6 401 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 ARID3AQ99856 593 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 NMUR1Q9HB89 426 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 POLMQ9NP87 494 aaPredicted RBP10.08□□□□□ -0.8
CHD7-208ENST00000528280 CNGB3Q9NQW8 809 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 ARHGEF4Q9NR80 690 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 ABCC13Q9NSE7 274 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 TSPAN16Q9UKR8 245 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 COL4A3Q01955 1670 aa10.08□□□□□ -0.8
CHD7-208ENST00000528280 KIF26AQ9ULI4 1882 aaPredicted RBP10.08□□□□□ -0.8
CHD7-208ENST00000528280 GTPBP10A4D1E9 387 aaKnown RBP10.07□□□□□ -0.8
CHD7-208ENST00000528280 O00370 1275 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 AXIN1O15169 862 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 RPP40O75818 363 aaKnown RBP10.07□□□□□ -0.8
CHD7-208ENST00000528280 RHOBTB1O94844 696 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 CYBBP04839 570 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 IRF1P10914 325 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 ERCC5P28715 1186 aaPredicted RBP10.07□□□□□ -0.8
CHD7-208ENST00000528280 SLC6A11P48066 632 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 ZNF445P59923 1031 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 USP39Q53GS9 565 aaKnown RBP10.07□□□□□ -0.8
CHD7-208ENST00000528280 C2orf27AQ580R0 203 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 GBP6Q6ZN66 633 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 SCD5Q86SK9 330 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 TMEM25Q86YD3 366 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 UBR7Q8N806 425 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 SLC35F5Q8WV83 523 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 ZC3H10Q96K80 434 aaKnown RBP10.07□□□□□ -0.8
CHD7-208ENST00000528280 GBP4Q96PP9 640 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 TRIM62Q9BVG3 475 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 BBS2Q9BXC9 721 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 IRX2Q9BZI1 471 aaPredicted RBP10.07□□□□□ -0.8
CHD7-208ENST00000528280 CLSTN2Q9H4D0 955 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 THAP9Q9H5L6 903 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 UBE2TQ9NPD8 197 aaPredicted RBP10.07□□□□□ -0.8
CHD7-208ENST00000528280 OSER1Q9NX31 292 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 MARK1Q9P0L2 795 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 MARCH2Q9P0N8 246 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 MMP17Q9ULZ9 603 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 CNTN6Q9UQ52 1028 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 STARD13Q9Y3M8 1113 aa10.07□□□□□ -0.8
CHD7-208ENST00000528280 HBS1LQ9Y450 684 aaKnown RBP10.07□□□□□ -0.8
CHD7-208ENST00000528280 HELZP42694 1942 aaKnown RBP10.06□□□□□ -0.8
CHD7-208ENST00000528280 GOLGA6L22H0YM25 854 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 NPC1O15118 1278 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 SART1O43290 800 aaKnown RBP10.06□□□□□ -0.8
CHD7-208ENST00000528280 TULP3O75386 442 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 STC2O76061 302 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 FBXO21O94952 628 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 ACADSBP45954 432 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 MTIF2P46199 727 aaKnown RBP10.06□□□□□ -0.8
CHD7-208ENST00000528280 HARS2P49590 506 aaKnown RBP10.06□□□□□ -0.8
CHD7-208ENST00000528280 PGFP49763 221 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 SNX16P57768 344 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 LMNB2Q03252 620 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 EFEMP1Q12805 493 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 CRY1Q16526 586 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 MEA1Q16626 185 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 GAB4Q2WGN9 574 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 BSPRYQ5W0U4 402 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 GRAMD4Q6IC98 578 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 RRAGAQ7L523 313 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.06□□□□□ -0.8
CHD7-208ENST00000528280 TTC30AQ86WT1 665 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms