RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 RANBP9Q96S59 729 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 RMDN3Q96TC7 470 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 CYTH2Q99418 400 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 C1orf50Q9BV19 199 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 NOC4LQ9BVI4 516 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 AP1M1Q9BXS5 423 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 SAP130Q9H0E3 1048 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 CSRNP2Q9H175 543 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 RNF41Q9H4P4 317 aaPredicted RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 SP140LQ9H930 580 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 ARL8BQ9NVJ2 186 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 THG1LQ9NWX6 298 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 ABI2Q9NYB9 513 aaPredicted RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 TAS2R1Q9NYW7 299 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 SUCOQ9UBS9 1254 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 XPO7Q9UIA9 1087 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 VPS51Q9UID3 782 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 DAPK2Q9UIK4 370 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 DBR1Q9UK59 544 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 NUP50Q9UKX7 468 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 GRID1Q9ULK0 1009 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 PPM1HQ9ULR3 514 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 ANGEL1Q9UNK9 670 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 SLIT3O75094 1523 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 METP08581 1390 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 PALLDQ8WX93 1383 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 PHRF1Q9P1Y6 1649 aaKnown RBP6.02□□□□□ -1.45
CD44-225ENST00000527326 ECM29Q5VYK3 1845 aa6.02□□□□□ -1.45
CD44-225ENST00000527326 PFASO15067 1338 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 SPATA31A6Q5VVP1 1343 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 ZNF532Q9HCE3 1301 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 A0A0A6YYK5 440 aaPredicted RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 LRRC53A6NM62 1247 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 PSMD11O00231 422 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 VWA5AO00534 786 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 SHOXO15266 292 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 MTSS1O43312 755 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 NMT2O60551 498 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 CCNT1O60563 726 aaKnown RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 SNAP91O60641 907 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 UGT1A9O60656 530 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 KPNA6O60684 536 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 NOL3O60936 208 aaKnown RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 CDH16O75309 829 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 USP1O94782 785 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 MYO1DO94832 1006 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 TGDSO95455 350 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 FGAP02671 866 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 RPN1P04843 607 aaKnown RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 ITGB3P05106 788 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 GSTM1P09488 218 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 RBP3P10745 1247 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 NID1P14543 1247 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 UGT1A6P19224 532 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 ITGAXP20702 1163 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 UGT1A1P22309 533 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 UGT1A4P22310 534 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 KLRC1P26715 233 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 PON1P27169 355 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 RPA1P27694 616 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 CIITAP33076 1130 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 UGT1A3P35503 534 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 UGT1A5P35504 534 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 GRIK1P39086 918 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 DNA2P51530 1060 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 ZNF135P52742 658 aaPredicted RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 AP2S1P53680 142 aaPredicted RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 PLTPP55058 493 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 RNASE9P60153 205 aaKnown RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 CDK16Q00536 496 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 MYBPC1Q00872 1141 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 PRKCEQ02156 737 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 BTKQ06187 659 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 SMARCB1Q12824 385 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 MAPK7Q13164 816 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 SELENBP1Q13228 472 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 RRP1BQ14684 758 aaKnown RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 TRIP10Q15642 601 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 GRIK4Q16099 956 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 SLC18A3Q16572 532 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 CYP2A13Q16696 494 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 ZBED5Q49AG3 693 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 CAVIN4Q5BKX8 364 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 EFHC1Q5JVL4 640 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 OGFOD2Q6N063 350 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 TTI2Q6NXR4 508 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 APOA5Q6Q788 366 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 KCTD20Q7Z5Y7 419 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 PRUNE1Q86TP1 453 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 AKAP14Q86UN6 197 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 NLRP10Q86W26 655 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 ZNF354CQ86Y25 554 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 JAMLQ86YT9 394 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 GALNT13Q8IUC8 556 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 ULK2Q8IYT8 1036 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 RGL4Q8IZJ4 473 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 GALNT4Q8N4A0 578 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 METTL13Q8N6R0 699 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 ANKRD13CQ8N6S4 541 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 RFWD2Q8NHY2 731 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms