RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 MLLT1Q03111 559 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-203ENST00000527275 ZNF252P-AS1Q0IIN9 211 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 SIX1Q15475 284 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-203ENST00000527275 CYP1B1Q16678 543 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 FAM153CQ494X1 144 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 DDX42Q86XP3 938 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMPD1-203ENST00000527275 KATNAL2Q8IYT4 538 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 ZBTB9Q96C00 473 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 FAM153AQ9UHL3 310 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 USP3Q9Y6I4 520 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 ZBED1O96006 694 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 HLTFQ14527 1009 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMPD1-203ENST00000527275 KCTD19Q17RG1 926 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-203ENST00000527275 SLC26A9Q7LBE3 791 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 NUP93Q8N1F7 819 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 SEC14L1Q92503 715 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 TIFAQ96CG3 184 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 RAB17Q9H0T7 212 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 HSFX1Q9UBD0 423 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 PCYOX1Q9UHG3 505 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 EPOPA6NHQ4 379 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 PRRG1O14668 218 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 DAPK3O43293 454 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 OAS2P29728 719 aaKnown RBP19.6■□□□□ 0.73
SMPD1-203ENST00000527275 ELF1P32519 619 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 DAOAP59103 153 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 USP46P62068 366 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 RPL10AP62906 217 aaKnown RBP19.6■□□□□ 0.73
SMPD1-203ENST00000527275 CCDC137Q6PK04 289 aaKnown RBP19.6■□□□□ 0.73
SMPD1-203ENST00000527275 DENND5BQ6ZUT9 1274 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 MAIP1Q8WWC4 291 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 TRIM51Q9BSJ1 452 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 PATJQ8NI35 1801 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 YJEFN3A6XGL0 299 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 E7ENQ6 273 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 H3BQF6 201 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 FBXO21O94952 628 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 GJC1P36383 396 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 FLT3P36888 993 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 PTGIRP43119 386 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 PM20D1Q6GTS8 502 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 TTC27Q6P3X3 843 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 LILRA6Q6PI73 481 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 CCDC50Q8IVM0 306 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 TCEAL8Q8IYN2 117 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 NIPA2Q8N8Q9 360 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 EXD1Q8NHP7 514 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 GIPC2Q8TF65 315 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 GDPD5Q8WTR4 605 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 FAM149B1Q96BN6 582 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 ERP44Q9BS26 406 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 FAM114A2Q9NRY5 505 aa19.6■□□□□ 0.73
SMPD1-203ENST00000527275 LPXNO60711 386 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 ECHS1P30084 290 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 COILP38432 576 aaPredicted RBP19.59■□□□□ 0.73
SMPD1-203ENST00000527275 SMAD3P84022 425 aaKnown RBP19.59■□□□□ 0.73
SMPD1-203ENST00000527275 MTMR3Q13615 1198 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 EFHC1Q5JVL4 640 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 TRNP1Q6NT89 227 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 JAMLQ86YT9 394 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 C12orf50Q8NA57 414 aaPredicted RBP19.59■□□□□ 0.73
SMPD1-203ENST00000527275 SPATA17Q96L03 361 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 RUNDC3BQ96NL0 473 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 LRRC19Q9H756 370 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 RASAL2Q9UJF2 1139 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 TCF4P15884 667 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 PSMA2P25787 234 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 SCNN1AP37088 669 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 YWHAZP63104 245 aaKnown RBP19.59■□□□□ 0.73
SMPD1-203ENST00000527275 LRRC38Q5VT99 294 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 HFE2Q6ZVN8 426 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 BHLHA9Q7RTU4 235 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 DPH5Q9H2P9 285 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 YIPF1Q9Y548 306 aa19.59■□□□□ 0.73
SMPD1-203ENST00000527275 C2CD4BA6NLJ0 364 aa19.58■□□□□ 0.72
SMPD1-203ENST00000527275 FNTAP49354 379 aa19.58■□□□□ 0.72
SMPD1-203ENST00000527275 ATP13A4Q4VNC1 1196 aa19.58■□□□□ 0.72
SMPD1-203ENST00000527275 DUPD1Q68J44 220 aa19.58■□□□□ 0.72
SMPD1-203ENST00000527275 CCDC105Q8IYK2 499 aa19.58■□□□□ 0.72
SMPD1-203ENST00000527275 TSEN2Q8NCE0 465 aaKnown RBP19.58■□□□□ 0.72
SMPD1-203ENST00000527275 FNIP1Q8TF40 1166 aa19.58■□□□□ 0.72
SMPD1-203ENST00000527275 HERPUD2Q9BSE4 406 aa19.58■□□□□ 0.72
SMPD1-203ENST00000527275 TRIM31Q9BZY9 425 aa19.58■□□□□ 0.72
SMPD1-203ENST00000527275 RFXAPO00287 272 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 HSF2BPO75031 334 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 GLUD1P00367 558 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 RALAP11233 206 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 PDGFRAP16234 1089 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 ALDH1A3P47895 512 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 CLCN4P51793 760 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 HSP90B2PQ58FF3 399 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 ZFYVE27Q5T4F4 411 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 PDE12Q6L8Q7 609 aaKnown RBP19.57■□□□□ 0.72
SMPD1-203ENST00000527275 RCOR2Q8IZ40 523 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 RXFP2Q8WXD0 754 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 RNF25Q96BH1 459 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-203ENST00000527275 HEMGNQ9BXL5 484 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 OSBPL8Q9BZF1 889 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 FBXO44Q9H4M3 255 aa19.57■□□□□ 0.72
SMPD1-203ENST00000527275 MAFFQ9ULX9 164 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms