RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 TRIM49D1C9J1S8 452 aa21.15■□□□□ 0.98
SMIM3-201ENST00000526627 BGNP21810 368 aa21.15■□□□□ 0.98
SMIM3-201ENST00000526627 GBE1Q04446 702 aa21.15■□□□□ 0.98
SMIM3-201ENST00000526627 DPYSL2Q16555 572 aa21.15■□□□□ 0.98
SMIM3-201ENST00000526627 KIZQ2M2Z5 673 aa21.15■□□□□ 0.98
SMIM3-201ENST00000526627 SOWAHAQ2M3V2 549 aa21.15■□□□□ 0.98
SMIM3-201ENST00000526627 ARHGAP17Q68EM7 881 aa21.15■□□□□ 0.98
SMIM3-201ENST00000526627 CENPIQ92674 756 aaPredicted RBP21.15■□□□□ 0.98
SMIM3-201ENST00000526627 EIF2AQ9BY44 585 aaKnown RBP21.15■□□□□ 0.98
SMIM3-201ENST00000526627 SAR1AQ9NR31 198 aa21.15■□□□□ 0.98
SMIM3-201ENST00000526627 NOP53Q9NZM5 478 aaKnown RBP21.15■□□□□ 0.98
SMIM3-201ENST00000526627 HESX1Q9UBX0 185 aa21.15■□□□□ 0.98
SMIM3-201ENST00000526627 UGT1A9O60656 530 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 PTPN9P43378 593 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 SERPINB4P48594 390 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 FAM13CQ8NE31 585 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 GPRC5AQ8NFJ5 357 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 NSMCE1Q8WV22 266 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 TTC17Q96AE7 1141 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 TRIM56Q9BRZ2 755 aaKnown RBP21.14■□□□□ 0.97
SMIM3-201ENST00000526627 TRIM55Q9BYV6 548 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 UGT1A7Q9HAW7 530 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 UGT1A10Q9HAW8 530 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 UGT1A8Q9HAW9 530 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 RNF19AQ9NV58 838 aa21.14■□□□□ 0.97
SMIM3-201ENST00000526627 TRDMT1O14717 391 aaKnown RBP21.13■□□□□ 0.97
SMIM3-201ENST00000526627 ELF1P32519 619 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 UNC5AQ6ZN44 842 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 ZDHHC17Q8IUH5 632 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 CTAGE3PQ8IX95 158 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 SIGLEC10Q96LC7 697 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 SRPK1Q96SB4 655 aaKnown RBP21.13■□□□□ 0.97
SMIM3-201ENST00000526627 TLE6Q9H808 572 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 LNPEPQ9UIQ6 1025 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 HES2Q9Y543 173 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 GCATO75600 419 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 TGDSO95455 350 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 IL1BP01584 269 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 DLDP09622 509 aaKnown RBP21.13■□□□□ 0.97
SMIM3-201ENST00000526627 HOXD8P13378 290 aaPredicted RBP21.13■□□□□ 0.97
SMIM3-201ENST00000526627 EPHB2P29323 1055 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 GLRA4Q5JXX5 417 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 SLC26A9Q7LBE3 791 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 LONP2Q86WA8 852 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 UNC93AQ86WB7 457 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 CDKL3Q8IVW4 592 aaPredicted RBP21.13■□□□□ 0.97
SMIM3-201ENST00000526627 LRRC52Q8N7C0 313 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 OR6B3Q8NGW1 331 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 GIMAP7Q8NHV1 300 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 CDHR5Q9HBB8 845 aa21.13■□□□□ 0.97
SMIM3-201ENST00000526627 A0A0G2JND7 137 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 RFPL1O75677 317 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 APOEP02649 317 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 MMP3P08254 477 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 SNRPAP09012 282 aaKnown RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 GM2AP17900 193 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 CCNFP41002 786 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 TMEM62Q0P6H9 643 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 ALKAL1Q6UXT8 129 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 MPP5Q8N3R9 675 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 LRRC39Q96DD0 335 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 KCTD15Q96SI1 283 aaPredicted RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 MYCBPQ99417 103 aaPredicted RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 HEY2Q9UBP5 337 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 NKX1-2Q9UD57 310 aaPredicted RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 GTF2IRD1Q9UHL9 959 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 KAT6AQ92794 2004 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 RPSAP08865 295 aaKnown RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 CSH1P0DML2 217 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 CSH2P0DML3 217 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 CCDC130P13994 396 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 SMPD1P17405 629 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 RPL34P49207 117 aaKnown RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 MRPS5P82675 430 aaKnown RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 SNAPC2Q13487 334 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 C9orf57Q5W0N0 161 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 TRMT10BQ6PF06 316 aaKnown RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 CCDC33Q8N5R6 958 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 KBTBD7Q8WVZ9 684 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 SKA1Q96BD8 255 aa21.12■□□□□ 0.97
SMIM3-201ENST00000526627 PRR11Q96HE9 360 aaPredicted RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 DHX35Q9H5Z1 703 aaKnown RBP21.12■□□□□ 0.97
SMIM3-201ENST00000526627 COPEO14579 308 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 DIAPH2O60879 1101 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 PEX11AO75192 247 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 GPR32O75388 356 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 PTPN4P29074 926 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 SLC27A1Q6PCB7 646 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 N4BP2L2Q92802 583 aaPredicted RBP21.11■□□□□ 0.97
SMIM3-201ENST00000526627 MIPEPQ99797 713 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 TMEM120AQ9BXJ8 343 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 SETD4Q9NVD3 440 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 RNF181Q9P0P0 153 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 AP4E1Q9UPM8 1137 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 PLLPQ9Y342 182 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 MFHAS1Q9Y4C4 1052 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 HMX2A2RU54 273 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 A8MXQ7 604 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 KLF11O14901 512 aa21.11■□□□□ 0.97
SMIM3-201ENST00000526627 GSTA2P09210 222 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms