RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PLAUP00749 431 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 MBPP02686 304 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-210ENST00000525878 MYBP10242 640 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 IL1R1P14778 569 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 ACVR2AP27037 513 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 CPA2P48052 419 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 CPT1AP50416 773 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 RAB27AP51159 221 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 ITGA8P53708 1063 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 CLCA4Q14CN2 919 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 PFKFB3Q16875 520 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-210ENST00000525878 STAG1Q8WVM7 1258 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 ZDHHC12Q96GR4 267 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 SACM1LQ9NTJ5 587 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 COL20A1Q9P218 1284 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 AFF4Q9UHB7 1163 aaKnown RBP4.91□□□□□ -1.62
CSDE1-210ENST00000525878 CAPN11Q9UMQ6 739 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 AQP7P3A6NL99 342 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 FOXN3O00409 490 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-210ENST00000525878 TLX3O43711 291 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-210ENST00000525878 MARCH6O60337 910 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 TXNP10599 105 aaKnown RBP4.9□□□□□ -1.63
CSDE1-210ENST00000525878 CDKN2AP42771 156 aaKnown RBP4.9□□□□□ -1.63
CSDE1-210ENST00000525878 COPAP53621 1224 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 SLC29A2Q14542 456 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 KPNB1Q14974 876 aaKnown RBP4.9□□□□□ -1.63
CSDE1-210ENST00000525878 CNN3Q15417 329 aaKnown RBP4.9□□□□□ -1.63
CSDE1-210ENST00000525878 C11orf44Q8N8P7 122 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 VPS50Q96JG6 964 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 STK31Q9BXU1 1019 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 NUAK2Q9H093 628 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 CHST8Q9H2A9 424 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 USP29Q9HBJ7 922 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 VPS45Q9NRW7 570 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 SLC27A6Q9Y2P4 619 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 COL15A1P39059 1388 aa4.9□□□□□ -1.63
CSDE1-210ENST00000525878 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-210ENST00000525878 C16orf96A6NNT2 1141 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 ZNF814B7Z6K7 855 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 FAM227AF5H4B4 570 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 CTNND1O60716 968 aaKnown RBP4.89□□□□□ -1.63
CSDE1-210ENST00000525878 CD63P08962 238 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 BRAFP15056 766 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 NTSR1P30989 418 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 HTR7P34969 479 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 TXNL4AP83876 142 aaKnown RBP4.89□□□□□ -1.63
CSDE1-210ENST00000525878 DNASE1L3Q13609 305 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 CNGA2Q16280 664 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 C3orf38Q5JPI3 329 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 ZNF793Q6ZN11 406 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 TFAP2DQ7Z6R9 452 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 ADHFE1Q8IWW8 467 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.89□□□□□ -1.633e-12■□□□□ 9.4
CSDE1-210ENST00000525878 FAM71DQ8N9W8 422 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 B4GALNT2Q8NHY0 566 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 TRMT61AQ96FX7 289 aaKnown RBP4.89□□□□□ -1.63
CSDE1-210ENST00000525878 THOC3Q96J01 351 aaKnown RBP4.89□□□□□ -1.63
CSDE1-210ENST00000525878 FCRL5Q96RD9 977 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 SELENOOQ9BVL4 669 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 GATA5Q9BWX5 397 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-210ENST00000525878 TMEM45AQ9NWC5 275 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 MID2Q9UJV3 735 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 NOTCH4Q99466 2003 aa4.89□□□□□ -1.63
CSDE1-210ENST00000525878 PRSS44E7EML9 344 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 RAB27BO00194 218 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 CA12O43570 354 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 EPN2O95208 641 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 TPH1P17752 444 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 BTF3P20290 206 aaKnown RBP4.88□□□□□ -1.63
CSDE1-210ENST00000525878 HOXA7P31268 230 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-210ENST00000525878 EIF4A1P60842 406 aaKnown RBP4.88□□□□□ -1.63
CSDE1-210ENST00000525878 RPS16P62249 146 aaKnown RBP4.88□□□□□ -1.63
CSDE1-210ENST00000525878 FMO1Q01740 532 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 STK3Q13188 491 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 FHL3Q13643 280 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 PLAG1Q6DJT9 500 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 GRHL2Q6ISB3 625 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 FAM57BQ71RH2 274 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 HIST1H2AAQ96QV6 131 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 SCNM1Q9BWG6 230 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 DNAJB11Q9UBS4 358 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 HDAC9Q9UKV0 1011 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 TPCN1Q9ULQ1 816 aa4.88□□□□□ -1.63
CSDE1-210ENST00000525878 EME2A4GXA9 379 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-210ENST00000525878 C4orf47A7E2U8 309 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 PDGFRBP09619 1106 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 RPS6KB1P23443 525 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 RBL1P28749 1068 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 GALNSP34059 522 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 JAK3P52333 1124 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 CCDC15Q0P6D6 951 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 MTAPQ13126 283 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 MANEAQ5SRI9 462 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 MANEALQ5VSG8 457 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 CLEC9AQ6UXN8 241 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 C18orf65Q6ZTR6 163 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 YAF2Q8IY57 180 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 SMCR8Q8TEV9 937 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-210ENST00000525878 SLC25A28Q96A46 364 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 MSI2Q96DH6 328 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms