RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 DCLK2Q8N568 766 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 CCDC33Q8N5R6 958 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 SUMF1Q8NBK3 374 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 BHMTQ93088 406 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 CDK5RAP1Q96SZ6 601 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 TUBGCP2Q9BSJ2 902 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 FAM126AQ9BYI3 521 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 MIS12Q9H081 205 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 NDST4Q9H3R1 872 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 ZDHHC4Q9NPG8 344 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 MARCH2Q9P0N8 246 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 AJAP1Q9UKB5 411 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
TRAPPC4-205ENST00000525079 BECN2A8MW95 431 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 KCNJ18B7U540 433 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 NEDD8-MDP1E9PL57 170 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 PES1O00541 588 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 TRIM24O15164 1050 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 THAP12O43422 761 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 HRO43593 1189 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 KAT7O95251 611 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 PAPSS2O95340 614 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 KLKB1P03952 638 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 APODP05090 189 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 DAOAP59103 153 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 COG7P83436 770 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 KCNJ12Q14500 433 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 STILQ15468 1287 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 MIIPQ5JXC2 388 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 BSPRYQ5W0U4 402 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 Q6ZNB5 142 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 USP33Q8TEY7 942 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 CLEC4CQ8WTT0 213 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 HHIPQ96QV1 700 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 HINFPQ9BQA5 517 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 BBS2Q9BXC9 721 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 SIX2Q9NPC8 291 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 ARHGEF4Q9NR80 690 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 ST7Q9NRC1 585 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 APEX2Q9UBZ4 518 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 SFMBT1Q9UHJ3 866 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 DNAJC12Q9UKB3 198 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 STRIP2Q9ULQ0 834 aa13.46□□□□□ -0.25
TRAPPC4-205ENST00000525079 KIAA1549LQ6ZVL6 1849 aa13.46□□□□□ -0.26
TRAPPC4-205ENST00000525079 GTPBP10A4D1E9 387 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 HOXC11O43248 304 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 TULP3O75386 442 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 PNMA6AP0CW24 399 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 TYRP14679 529 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 GNA15P30679 374 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 CORO1AP31146 461 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 TIE1P35590 1138 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 GPD2P43304 727 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 DMC1Q14565 340 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 SASS6Q6UVJ0 657 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 PRR23BQ6ZRT6 265 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 RBM43Q6ZSC3 357 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 ENOSF1Q7L5Y1 443 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 LONP2Q86WA8 852 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 DENND1CQ8IV53 801 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 FMNL3Q8IVF7 1028 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 ETFBKMTQ8IXQ9 262 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 PHTF2Q8N3S3 785 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 RNF139Q8WU17 664 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 ZNF606Q8WXB4 792 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 EPC1Q9H2F5 836 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 CNGB3Q9NQW8 809 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 TAB2Q9NYJ8 693 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 PLK2Q9NYY3 685 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 AGO1Q9UL18 857 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 SMG5Q9UPR3 1016 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 NFE2L3Q9Y4A8 694 aa13.45□□□□□ -0.26
TRAPPC4-205ENST00000525079 TBC1D3BA6NDS4 549 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 MED7O43513 233 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 KLF8O95600 359 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 EIF2DP41214 584 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 GRIA2P42262 883 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 SIM2Q14190 667 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 TCP11X2Q5H9J9 407 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 C11orf57Q6ZUT1 292 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 SYT13Q7L8C5 426 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 WDR5BQ86VZ2 330 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 ALLCQ8N6M5 410 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 ENOX1Q8TC92 643 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 P2RY11Q96G91 374 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 HSFY1Q96LI6 401 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 FAM81BQ96LP2 452 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 VPS16Q9H269 839 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 ABCC13Q9NSE7 274 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 OLA1Q9NTK5 396 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 DNAJC17Q9NVM6 304 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 NCDNQ9UBB6 729 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 CYTH4Q9UIA0 394 aa13.44□□□□□ -0.26
TRAPPC4-205ENST00000525079 PIEZO1Q92508 2521 aa13.43□□□□□ -0.26
TRAPPC4-205ENST00000525079 A0A0A0MRY4 1105 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms