RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ALLCQ8N6M5 410 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 EHBP1Q8NDI1 1231 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 LMO3Q8TAP4 145 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 RMDN1Q96DB5 314 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 IPO9Q96P70 1041 aaKnown RBP19.48■□□□□ 0.71
CAPN1-203ENST00000525013 BBS2Q9BXC9 721 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 ULBP1Q9BZM6 244 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 MMP17Q9ULZ9 603 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 NEDD8-MDP1E9PL57 170 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 O00370 1275 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 STC2O76061 302 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 PAEPP09466 180 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 DGKEP52429 567 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 COG7P83436 770 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 ADIGQ0VDE8 80 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 NUDT18Q6ZVK8 323 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 CACNA2D4Q7Z3S7 1137 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 KBTBD6Q86V97 674 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 ARHGEF19Q8IW93 802 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 ETFBKMTQ8IXQ9 262 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 SIX6OS1Q8N1H7 587 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 TXNDC5Q8NBS9 432 aaKnown RBP19.47■□□□□ 0.71
CAPN1-203ENST00000525013 TFAP2BQ92481 460 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 NDRG1Q92597 394 aaKnown RBP19.47■□□□□ 0.71
CAPN1-203ENST00000525013 BHMTQ93088 406 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 XPO6Q96QU8 1125 aaKnown RBP19.47■□□□□ 0.71
CAPN1-203ENST00000525013 PARD6AQ9NPB6 346 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 DNAJC17Q9NVM6 304 aaKnown RBP19.47■□□□□ 0.71
CAPN1-203ENST00000525013 MARCH2Q9P0N8 246 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 WDR35Q9P2L0 1181 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 RWDD2AQ9UIY3 292 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 STRIP2Q9ULQ0 834 aa19.47■□□□□ 0.71
CAPN1-203ENST00000525013 A0A0A0MRY4 1105 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 RNF225M0QZC1 329 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-203ENST00000525013 SETSIPP0DME0 302 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 TYRP14679 529 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 MARSP56192 900 aaKnown RBP19.46■□□□□ 0.71
CAPN1-203ENST00000525013 PM20D1Q6GTS8 502 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 GRAMD4Q6IC98 578 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 ANO7Q6IWH7 933 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 LCLAT1Q6UWP7 414 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 Q6ZNB5 142 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 PHTF2Q8N3S3 785 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 IL17RCQ8NAC3 791 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 RBBP8NLQ8NC74 664 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-203ENST00000525013 INTS2Q9H0H0 1204 aaKnown RBP19.46■□□□□ 0.71
CAPN1-203ENST00000525013 ZDHHC4Q9NPG8 344 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 EBF1Q9UH73 591 aa19.46■□□□□ 0.71
CAPN1-203ENST00000525013 DCHS1Q96JQ0 3298 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 THADAQ6YHU6 1953 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 SLC12A8A0AV02 714 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 TRIM24O15164 1050 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 CALCAP01258 141 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 LCP1P13796 627 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 TGM1P22735 817 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 BRD2P25440 801 aaKnown RBP19.45■□□□□ 0.7
CAPN1-203ENST00000525013 GCNT1Q02742 428 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 LMNB2Q03252 620 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 CRY1Q16526 586 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 RSPO4Q2I0M5 234 aaPredicted RBP19.45■□□□□ 0.7
CAPN1-203ENST00000525013 C10orf76Q5T2E6 689 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 DCLK3Q9C098 648 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 INVSQ9Y283 1065 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 ZNF510Q9Y2H8 683 aa19.45■□□□□ 0.7
CAPN1-203ENST00000525013 SPTBN2O15020 2390 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 GON4LQ3T8J9 2241 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 M0QYV0 167 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 SGK1O00141 431 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 LRP3O75074 770 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 ALDH1A2O94788 518 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 KLKB1P03952 638 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 KRT5P13647 590 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 CORO1AP31146 461 aaKnown RBP19.44■□□□□ 0.7
CAPN1-203ENST00000525013 KIR2DL1P43626 348 aaPredicted RBP19.44■□□□□ 0.7
CAPN1-203ENST00000525013 RGS7P49802 495 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 STILQ15468 1287 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 CNGA2Q16280 664 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 HSF5Q4G112 596 aaPredicted RBP19.44■□□□□ 0.7
CAPN1-203ENST00000525013 USP39Q53GS9 565 aaKnown RBP19.44■□□□□ 0.7
CAPN1-203ENST00000525013 EOGTQ5NDL2 527 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 TMEM92Q6UXU6 159 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 DENND1CQ8IV53 801 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 TERB1Q8NA31 727 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 MLKLQ8NB16 471 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 RNF139Q8WU17 664 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 KCTD13Q8WZ19 329 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 CNOT6LQ96LI5 555 aaKnown RBP19.44■□□□□ 0.7
CAPN1-203ENST00000525013 KREMEN1Q96MU8 473 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 TPSD1Q9BZJ3 242 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 UBE2TQ9NPD8 197 aaPredicted RBP19.44■□□□□ 0.7
CAPN1-203ENST00000525013 SEMA4GQ9NTN9 838 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 PLK2Q9NYY3 685 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 MARK1Q9P0L2 795 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.44■□□□□ 0.7
CAPN1-203ENST00000525013 CACNA1AO00555 2505 aa19.44■□□□□ 0.7
CAPN1-203ENST00000525013 PRR5-ARHGAP8B1AHC4 643 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 PIK3R2O00459 728 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 DCLK1O15075 740 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 CACNG3O60359 315 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 HNRNPLP14866 589 aaKnown RBP eCLIP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms