RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 MTSS1LQ765P7 747 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 MON1BQ7L1V2 547 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 TAC4Q86UU9 113 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ZNF677Q86XU0 584 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CPNE8Q86YQ8 564 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 DENND1CQ8IV53 801 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 MFSD6LQ8IWD5 586 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 SFTPA1Q8IWL2 248 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 BBS7Q8IWZ6 715 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 MCOLN2Q8IZK6 566 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 SIX5Q8N196 739 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CELF5Q8N6W0 485 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 NAT16Q8N8M0 369 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 OR8K1Q8NGG5 319 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 DQX1Q8TE96 717 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 OVCA2Q8WZ82 227 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 GOLGA1Q92805 767 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 RNF34Q969K3 372 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ELSPBP1Q96BH3 223 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ZNF653Q96CK0 615 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 C18orf8Q96DM3 657 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ERLEC1Q96DZ1 483 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 MYEOVQ96EZ4 313 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 P2RY11Q96G91 374 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 MRFAP1L1Q96HT8 127 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 BTBD6Q96KE9 485 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 MCEEQ96PE7 176 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 NOX5Q96PH1 765 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 TBCBQ99426 244 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 TRMT61BQ9BVS5 477 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 KLF16Q9BXK1 252 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 UBXN6Q9BZV1 441 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 NHEJ1Q9H9Q4 299 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 GRPEL1Q9HAV7 217 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ZDHHC4Q9NPG8 344 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CYLDQ9NQC7 956 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 HPS4Q9NQG7 708 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CNGB3Q9NQW8 809 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 COMMD8Q9NX08 183 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 DUS2Q9NX74 493 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 PLK2Q9NYY3 685 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 EHD2Q9NZN4 543 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ADAM22Q9P0K1 906 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 MARCH2Q9P0N8 246 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 DNMT3LQ9UJW3 386 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 FBXL21Q9UKT6 434 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 NDRG2Q9UN36 371 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 USTQ9Y2C2 406 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 SH3BP1Q9Y3L3 701 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 C2orf16Q68DN1 1984 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 TCF20Q9UGU0 1960 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 A0A0U1RQJ8 604 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 KRBA1A5PL33 1030 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TMEM110-MUSTN1A8MSY1 372 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 M0QYT0 321 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TNFRSF10AO00220 468 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 DLL1O00548 723 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 DCXO43602 365 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 PI15O43692 258 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 GREM1O60565 184 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 RTN2O75298 545 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ECI2O75521 394 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 FBXO21O94952 628 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 LSM8O95777 96 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 OLFM2O95897 454 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TRUB2O95900 331 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TPM1P09493 284 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 CCDC172P0C7W6 258 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 PSMC3P17980 439 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 DDX6P26196 483 aaKnown RBP eCLIP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 HOXC13P31276 330 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 RFC1P35251 1148 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 PRKCIP41743 596 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 GABRB2P47870 512 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC6A11P48066 632 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 PPP3CCP48454 512 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 IRAK1P51617 712 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 SGSHP51688 502 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 KPNA1P52294 538 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 GALCP54803 685 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TBX4P57082 545 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC7A9P82251 487 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ZXDAP98168 799 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 OGDHQ02218 1023 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 CENPCQ03188 943 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 MESP2Q0VG99 397 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TRIM14Q14142 442 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TSR1Q2NL82 804 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 ANO4Q32M45 955 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 CCDC14Q49A88 953 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 EFHC1Q5JVL4 640 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 LY6G5CQ5SRR4 150 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 OTUD1Q5VV17 481 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 SNX30Q5VWJ9 437 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 NADSYN1Q6IA69 706 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 DNAJC24Q6P3W2 148 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TXNDC11Q6PKC3 985 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 TPRG1Q6ZUI0 275 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 C12orf40Q86WS4 652 aa4.8□□□□□ -1.64
CHMP4A-202ENST00000524955 CIR1Q86X95 450 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms