RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ASPSCR1Q9BZE9 553 aa7.85□□□□□ -1.15
NEDD8-203ENST00000524927 TRIM8Q9BZR9 551 aa7.85□□□□□ -1.15
NEDD8-203ENST00000524927 PLEKHA4Q9H4M7 779 aa7.85□□□□□ -1.15
NEDD8-203ENST00000524927 ACSS2Q9NR19 701 aa7.85□□□□□ -1.15
NEDD8-203ENST00000524927 KCNH7Q9NS40 1196 aa7.85□□□□□ -1.15
NEDD8-203ENST00000524927 TRHDEQ9UKU6 1024 aa7.85□□□□□ -1.15
NEDD8-203ENST00000524927 LRBAP50851 2863 aa7.85□□□□□ -1.15
NEDD8-203ENST00000524927 KAT6AQ92794 2004 aa7.85□□□□□ -1.15
NEDD8-203ENST00000524927 SPTBN1Q01082 2364 aaKnown RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 PTPRCP08575 1304 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 FRMPD4Q14CM0 1322 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 ATG2BQ96BY7 2078 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 E9PAM4 449 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 RRP8O43159 456 aaKnown RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 TGM5O43548 720 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 TSPAN15O95858 294 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 PTPN1P18031 435 aaKnown RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 UBA1P22314 1058 aaKnown RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 LSP1P33241 339 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 GJA4P35212 333 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 MLLT6P55198 1093 aaPredicted RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 NR1I3Q14994 352 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 KARSQ15046 597 aaKnown RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 RALBP1Q15311 655 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 DGKKQ5KSL6 1271 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 TMEM173Q86WV6 379 aaPredicted RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 LRRC56Q8IYG6 542 aaPredicted RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 HDDC3Q8N4P3 179 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 MED8Q96G25 268 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 MSANTD3Q96H12 275 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 AHCYL2Q96HN2 611 aaKnown RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 PI4K2AQ9BTU6 479 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 MRPL17Q9NRX2 175 aaKnown RBP7.84□□□□□ -1.15
NEDD8-203ENST00000524927 C2orf42Q9NWW7 574 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 FAM53CQ9NYF3 392 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 TCEAL9Q9UHQ7 104 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 B3GALT1Q9Y5Z6 326 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 NAV3Q8IVL0 2385 aa7.84□□□□□ -1.15
NEDD8-203ENST00000524927 ZBED9Q6R2W3 1325 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 WDR19Q8NEZ3 1342 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 TCRBV5S2A0A599 114 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 PRAMEF25A6NGN4 478 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 FAM90A27PA6NNH2 459 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 PATE3B3GLJ2 98 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 PRKAB2O43741 272 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 BUB1BO60566 1050 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-203ENST00000524927 EPHA5P54756 1037 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 ERVFRD-1P60508 538 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 SP2Q02086 613 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 PPFIA1Q13136 1202 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 TTF1Q15361 905 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-203ENST00000524927 TMEM266Q2M3C6 531 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 MARCH8Q5T0T0 291 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 SLC9C2Q5TAH2 1124 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 SYDE2Q5VT97 1194 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 CC2D1AQ6P1N0 951 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-203ENST00000524927 CTR9Q6PD62 1173 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 BTNL9Q6UXG8 535 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 Q6ZS52 159 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 TOGARAM2Q6ZUX3 1019 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 PNPLA1Q8N8W4 532 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 CLRN3Q8NCR9 226 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 RSPH1Q8WYR4 309 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 DLG3Q92796 817 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 INTS4Q96HW7 963 aaKnown RBP7.83□□□□□ -1.16
NEDD8-203ENST00000524927 TAAR1Q96RJ0 339 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 RMDN3Q96TC7 470 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 YIPF4Q9BSR8 244 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 NUSAP1Q9BXS6 441 aaKnown RBP7.83□□□□□ -1.16
NEDD8-203ENST00000524927 TRIM4Q9C037 500 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 ARMT1Q9H993 441 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 SSX2IPQ9Y2D8 614 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 NOC2LQ9Y3T9 749 aaKnown RBP7.83□□□□□ -1.16
NEDD8-203ENST00000524927 TELO2Q9Y4R8 837 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 PIAS3Q9Y6X2 628 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 FPGT-TNNI3KV9GXZ4 949 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 BAZ2AQ9UIF9 1905 aaKnown RBP7.83□□□□□ -1.16
NEDD8-203ENST00000524927 NUP205Q92621 2012 aa7.83□□□□□ -1.16
NEDD8-203ENST00000524927 WDR81Q562E7 1941 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 RPS6KA5O75582 802 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 CYP17A1P05093 508 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 GLI1P08151 1106 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 PTX3P26022 381 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-203ENST00000524927 HOXC13P31276 330 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 PXNP49023 591 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-203ENST00000524927 PRR5P85299 388 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 SLC9A5Q14940 896 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 SEC23AQ15436 765 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 TERF2Q15554 542 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 ARHGEF16Q5VV41 709 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 LILRA6Q6PI73 481 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 VN1R3Q9BXE9 311 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 FAM49AQ9H0Q0 323 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-203ENST00000524927 SLC6A17Q9H1V8 727 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 BRD9Q9H8M2 597 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 ZNF287Q9HBT7 754 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 ARPP21Q9UBL0 812 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-203ENST00000524927 PTPRBP23467 1997 aa7.82□□□□□ -1.16
NEDD8-203ENST00000524927 UTP20O75691 2785 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms