RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 LRRC52Q8N7C0 313 aa17.61■□□□□ 0.41
BEST1-203ENST00000524877 SNX31Q8N9S9 440 aa17.61■□□□□ 0.41
BEST1-203ENST00000524877 NPLOC4Q8TAT6 608 aa17.61■□□□□ 0.41
BEST1-203ENST00000524877 ULBP1Q9BZM6 244 aa17.61■□□□□ 0.41
BEST1-203ENST00000524877 RASA4BC9J798 803 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 DNM1LO00429 736 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 RASA4O43374 803 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 DDHD2O94830 711 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 CRTAMO95727 393 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 ADH1CP00326 375 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 ATP1A1P05023 1023 aaKnown RBP17.6■□□□□ 0.41
BEST1-203ENST00000524877 OR1D2P34982 312 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 FBXW4P57775 412 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 RGL4Q8IZJ4 473 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 B3GALNT2Q8NCR0 500 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 ATXN7L3BQ96GX2 97 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 OLFM3Q96PB7 478 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 SH3GL2Q99962 352 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 ETAA1Q9NY74 926 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 SLC27A5Q9Y2P5 690 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 CCDC78A2IDD5 438 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 ANP32DO95626 131 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 RARGP13631 454 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 EEF1DP29692 281 aaKnown RBP17.6■□□□□ 0.41
BEST1-203ENST00000524877 ANKMY2Q8IV38 441 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 TRPM3Q9HCF6 1732 aaPredicted RBP17.6■□□□□ 0.41
BEST1-203ENST00000524877 GYPCP04921 128 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 ITGALP20701 1170 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 ZNF200P98182 395 aaPredicted RBP17.6■□□□□ 0.41
BEST1-203ENST00000524877 FBXO46Q6PJ61 603 aaPredicted RBP17.6■□□□□ 0.41
BEST1-203ENST00000524877 FAM71DQ8N9W8 422 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 FLCNQ8NFG4 579 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 NCF2P19878 526 aaPredicted RBP17.6■□□□□ 0.41
BEST1-203ENST00000524877 TNFSF9P41273 254 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 ACAD11Q709F0 780 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 OMDQ99983 421 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 COL20A1Q9P218 1284 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 NOVA2Q9UNW9 492 aaKnown RBP17.6■□□□□ 0.41
BEST1-203ENST00000524877 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.6■□□□□ 0.41
BEST1-203ENST00000524877 ABHD14A-ACY1A0A1B0GW23 586 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 LZTR1Q8N653 840 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 BRD9Q9H8M2 597 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 GTF2IRD1Q9UHL9 959 aa17.6■□□□□ 0.41
BEST1-203ENST00000524877 RBAK-RBAKDNI3L0D1 243 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 CLCN6P51797 869 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 ZNF135P52742 658 aaPredicted RBP17.59■□□□□ 0.41
BEST1-203ENST00000524877 MKRN4PQ13434 485 aaPredicted RBP17.59■□□□□ 0.41
BEST1-203ENST00000524877 RCN2Q14257 317 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 SPARCL1Q14515 664 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 NT5MQ9NPB1 228 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 TBC1D13Q9NVG8 400 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 SENP1Q9P0U3 644 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 PLAAQ9Y263 795 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 CHRM3P20309 590 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 STIP1P31948 543 aaKnown RBP17.59■□□□□ 0.41
BEST1-203ENST00000524877 DEFB106AQ8N104 65 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 SLC39A10Q9ULF5 831 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 CCL16O15467 120 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 RHOBTB1O94844 696 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 ITIH2P19823 946 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 NCAPHQ15003 741 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 C9orf57Q5W0N0 161 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 PARP9Q8IXQ6 854 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 RGPD5Q99666 1765 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 INPP1P49441 399 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 MRPS25P82663 173 aaKnown RBP17.59■□□□□ 0.41
BEST1-203ENST00000524877 CCDC80Q76M96 950 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 SCLYQ96I15 445 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 CHORDC1Q9UHD1 332 aaPredicted RBP17.59■□□□□ 0.41
BEST1-203ENST00000524877 A0A1W2PQ45 241 aaPredicted RBP17.59■□□□□ 0.41
BEST1-203ENST00000524877 A0A1W2PQY0 241 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 PRKCQQ04759 706 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 GPM6BQ13491 265 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 MTF1Q14872 753 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 SPPL2BQ8TCT7 592 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 FAM167BQ9BTA0 163 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 CASS4Q9NQ75 786 aa17.59■□□□□ 0.41
BEST1-203ENST00000524877 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.59■□□□□ 0.41
BEST1-203ENST00000524877 MORC2Q9Y6X9 1032 aaPredicted RBP17.59■□□□□ 0.41
BEST1-203ENST00000524877 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.41
BEST1-203ENST00000524877 SPATA31D3P0C874 917 aa17.58■□□□□ 0.41
BEST1-203ENST00000524877 SERPINB9P50453 376 aa17.58■□□□□ 0.41
BEST1-203ENST00000524877 SPATA31D4Q6ZUB0 917 aa17.58■□□□□ 0.41
BEST1-203ENST00000524877 TBCBQ99426 244 aa17.58■□□□□ 0.41
BEST1-203ENST00000524877 CD274Q9NZQ7 290 aa17.58■□□□□ 0.41
BEST1-203ENST00000524877 SPATA31C1P0DKV0 1188 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 WASHC5Q12768 1159 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 TFDP3Q5H9I0 405 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 KIAA1324Q6UXG2 1013 aaKnown RBP17.58■□□□□ 0.4
BEST1-203ENST00000524877 TFAP2DQ7Z6R9 452 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 ARL10Q8N8L6 244 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 RSPH1Q8WYR4 309 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 ZBTB10Q96DT7 871 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 FRMD8Q9BZ67 464 aaPredicted RBP17.58■□□□□ 0.4
BEST1-203ENST00000524877 TSPAN1O60635 241 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 H2AFYO75367 372 aaKnown RBP17.58■□□□□ 0.4
BEST1-203ENST00000524877 GABRR2P28476 465 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 HMOX2P30519 316 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 PLA2G4AP47712 749 aa17.58■□□□□ 0.4
BEST1-203ENST00000524877 SCNN1BP51168 640 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms