RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ZNF804AQ7Z570 1209 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 SLC44A2Q8IWA5 706 aaPredicted RBP4.49□□□□□ -1.69
SKP1-212ENST00000523966 ULK2Q8IYT8 1036 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 METTL25Q8N6Q8 603 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 PAF1Q8N7H5 531 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 FAM71DQ8N9W8 422 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 CAGE1Q8TC20 777 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 OTUD7AQ8TE49 926 aaPredicted RBP4.49□□□□□ -1.69
SKP1-212ENST00000523966 TRAPPC9Q96Q05 1148 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 PRR25Q96S07 402 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 TAF1DQ9H5J8 278 aaPredicted RBP4.49□□□□□ -1.69
SKP1-212ENST00000523966 DUSP22Q9NRW4 184 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 SYBUQ9NX95 663 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 ST3GAL5Q9UNP4 418 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 SCAF8Q9UPN6 1271 aaKnown RBP4.49□□□□□ -1.69
SKP1-212ENST00000523966 EPN1Q9Y6I3 576 aaPredicted RBP4.49□□□□□ -1.69
SKP1-212ENST00000523966 NCANO14594 1321 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 CCDC189A1A4V9 331 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 LINC00473A8K010 186 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 PCDH17O14917 1159 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 MATN3O15232 486 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 LARGE1O95461 756 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 GYS1P13807 737 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 TACR2P21452 398 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 MAPK9P45984 424 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 AARS2Q5JTZ9 985 aaKnown RBP4.48□□□□□ -1.69
SKP1-212ENST00000523966 AKNAD1Q5T1N1 836 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 TANGO2Q6ICL3 276 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 CCDC144NLQ6NUI1 221 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 NFRKBQ6P4R8 1299 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 CRIP3Q6Q6R5 217 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 BEND2Q8NDZ0 799 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 OR6Y1Q8NGX8 325 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 HMGB4Q8WW32 186 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 CPT1BQ92523 772 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 LARP4BQ92615 738 aaKnown RBP4.48□□□□□ -1.69
SKP1-212ENST00000523966 GOLGA1Q92805 767 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 GCC1Q96CN9 775 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 REXO5Q96IC2 774 aaKnown RBP4.48□□□□□ -1.69
SKP1-212ENST00000523966 FAR2Q96K12 515 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 WDR24Q96S15 920 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 PABPC3Q9H361 631 aaKnown RBP4.48□□□□□ -1.69
SKP1-212ENST00000523966 TOR3AQ9H497 397 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 CCDC134Q9H6E4 229 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 ELAC1Q9H777 363 aaKnown RBP4.48□□□□□ -1.69
SKP1-212ENST00000523966 USP29Q9HBJ7 922 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 DLL3Q9NYJ7 618 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 PACSIN3Q9UKS6 424 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 GABRQQ9UN88 632 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 ADAMTS5Q9UNA0 930 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 GTF2A1LQ9UNN4 478 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 PCDHGB3Q9Y5G1 929 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 COL4A3Q01955 1670 aa4.48□□□□□ -1.69
SKP1-212ENST00000523966 IPO5O00410 1097 aaKnown RBP4.47□□□□□ -1.69
SKP1-212ENST00000523966 SPRY2O43597 315 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 PPP6R2O75170 966 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 TAF5LO75529 589 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 TJP3O95049 919 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 CER1O95813 267 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 FGAP02671 866 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 GCP02774 474 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 SLC3A2P08195 630 aaKnown RBP4.47□□□□□ -1.69
SKP1-212ENST00000523966 C6P13671 934 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 KLRK1P26718 216 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 CTGFP29279 349 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 HTR7P34969 479 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 ADRA1BP35368 520 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 GDF5P43026 501 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 PAPOLAP51003 745 aaKnown RBP4.47□□□□□ -1.69
SKP1-212ENST00000523966 CCDC15Q0P6D6 951 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 KCNJ12Q14500 433 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 ZNF169Q14929 603 aaPredicted RBP4.47□□□□□ -1.69
SKP1-212ENST00000523966 TAF5Q15542 800 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 BTBD16Q32M84 506 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 ANKRD40Q6AI12 368 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 JMJD6Q6NYC1 403 aaPredicted RBP4.47□□□□□ -1.69
SKP1-212ENST00000523966 DBX2Q6ZNG2 339 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 TRABD2AQ86V40 505 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 SFTPA1Q8IWL2 248 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 CLASRPQ8N2M8 674 aaKnown RBP4.47□□□□□ -1.69
SKP1-212ENST00000523966 PNPLA1Q8N8W4 532 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 TBC1D5Q92609 795 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 HS6ST2Q96MM7 605 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 DUSP26Q9BV47 211 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 MLXIPQ9HAP2 919 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 PRDM8Q9NQV8 689 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 ITM2CQ9NQX7 267 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 LIN7CQ9NUP9 197 aaKnown RBP4.47□□□□□ -1.69
SKP1-212ENST00000523966 LPAR3Q9UBY5 353 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 BAG5Q9UL15 447 aa4.47□□□□□ -1.69
SKP1-212ENST00000523966 C19orf53Q9UNZ5 99 aaPredicted RBP4.47□□□□□ -1.69
SKP1-212ENST00000523966 UBE2J1Q9Y385 318 aaPredicted RBP4.47□□□□□ -1.69
SKP1-212ENST00000523966 TTC34A8MYJ7 566 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 CTIFO43310 598 aaKnown RBP4.46□□□□□ -1.7
SKP1-212ENST00000523966 RAMP2O60895 175 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 CST5P28325 142 aaPredicted RBP4.46□□□□□ -1.7
SKP1-212ENST00000523966 PLA2G5P39877 138 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 BUD31P41223 144 aaPredicted RBP4.46□□□□□ -1.7
SKP1-212ENST00000523966 RARRES1P49788 294 aa4.46□□□□□ -1.7
SKP1-212ENST00000523966 RNASELQ05823 741 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms