RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	CTSA	P10619	480 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	C6	P13671	934 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	HOXA6	P31267	233 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	CASQ1	P31415	396 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	CCT5	P48643	541 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	IRX4	P78413	519 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	PFKP	Q01813	784 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	APBA1	Q02410	837 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	GRM3	Q14832	879 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	PLCL1	Q15111	1095 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	SAFB	Q15424	915 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	NR0B2	Q15466	257 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	ZKSCAN8	Q15776	578 aa	Predicted RBP	5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	NTRK3	Q16288	839 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	PRSS53	Q2L4Q9	553 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	TUBB8	Q3ZCM7	444 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	RALGPS1	Q5JS13	557 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	AGAP9	Q5VTM2	703 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	ZPBP2	Q6X784	338 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	CCDC73	Q6ZRK6	1079 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	SEPT14	Q6ZU15	432 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	TP53INP2	Q8IXH6	220 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	OXR1	Q8N573	874 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	TMEM52	Q8NDY8	209 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	LMBR1	Q8WVP7	490 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	DIO2	Q92813	273 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	HVCN1	Q96D96	273 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	ZBTB10	Q96DT7	871 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	CCDC17	Q96LX7	622 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	TBATA	Q96M53	351 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	IWS1	Q96ST2	819 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	FAM167B	Q9BTA0	163 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	TRIM8	Q9BZR9	551 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	ADAMTS10	Q9H324	1103 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	KIAA1586	Q9HCI6	787 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	RASSF1	Q9NS23	344 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	GPR27	Q9NS67	375 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	RBM12	Q9NTZ6	932 aa	Known RBP	5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	BLOC1S4	Q9NUP1	217 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	KLHL11	Q9NVR0	708 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	NYAP2	Q9P242	653 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	RABL2B	Q9UNT1	228 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	SNX5	Q9Y5X3	404 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	CDY2A	Q9Y6F7	541 aa		5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	FN1	P02751	2386 aa	Known RBP	5.63	□□□□□ -1.51
PABPC1-223	ENST00000523636	CUBN	O60494	3623 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	FITM1	A5D6W6	292 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	TRABD2B	A6NFA1	517 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	TMEM232	C9JQI7	657 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636		F5H423	210 aa	Predicted RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	AQP7	O14520	342 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	INPPL1	O15357	1258 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	RPP40	O75818	363 aa	Known RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	CNP	P09543	421 aa	Known RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	RAC2	P15153	192 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	CAPN3	P20807	821 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	CALML3	P27482	149 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	ADSS	P30520	456 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	GDNF	P39905	211 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	EIF2S3	P41091	472 aa	Known RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	ALDH7A1	P49419	539 aa	Known RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	COPA	P53621	1224 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	CORO7	P57737	925 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	BPIFB3	P59826	476 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	RPS6	P62753	249 aa	Known RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	SP2	Q02086	613 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	GBX1	Q14549	363 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	SYDE2	Q5VT97	1194 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	SWSAP1	Q6NVH7	229 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	PKN3	Q6P5Z2	889 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	SLCO6A1	Q86UG4	719 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	VPS52	Q8N1B4	723 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636		Q8N3U1	123 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	SPEM1	Q8N4L4	309 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	GSTCD	Q8NEC7	633 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	LIN37	Q96GY3	246 aa	Predicted RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	PPM1M	Q96MI6	270 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	CAMK1G	Q96NX5	476 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	KXD1	Q9BQD3	176 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	TARS2	Q9BW92	718 aa	Known RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	TSPY26P	Q9H489	355 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	UPF2	Q9HAU5	1272 aa	Known RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	NLRC4	Q9NPP4	1024 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	LUC7L	Q9NQ29	371 aa	Known RBP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	MAN1C1	Q9NR34	630 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	MRGBP	Q9NV56	204 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	DCAF16	Q9NXF7	216 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	SPG21	Q9NZD8	308 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	TRHDE	Q9UKU6	1024 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	MAN2B2	Q9Y2E5	1009 aa		5.62	□□□□□ -1.51
PABPC1-223	ENST00000523636	PTPDC1	A2A3K4	754 aa		5.61	□□□□□ -1.51
PABPC1-223	ENST00000523636	PES1	O00541	588 aa	Known RBP	5.61	□□□□□ -1.51
PABPC1-223	ENST00000523636	GABRD	O14764	452 aa		5.61	□□□□□ -1.51
PABPC1-223	ENST00000523636	DCLK1	O15075	740 aa		5.61	□□□□□ -1.51
PABPC1-223	ENST00000523636	IPO8	O15397	1037 aa	Known RBP	5.61	□□□□□ -1.51
PABPC1-223	ENST00000523636	PRKAB2	O43741	272 aa		5.61	□□□□□ -1.51
PABPC1-223	ENST00000523636	HPX	P02790	462 aa		5.61	□□□□□ -1.51
PABPC1-223	ENST00000523636	IDE	P14735	1019 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms