RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 CMPK2Q5EBM0 449 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 TRIM68Q6AZZ1 485 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 APBB1IPQ7Z5R6 666 aaPredicted RBP18.54■□□□□ 0.56
IKBKB-228ENST00000523517 CDKL3Q8IVW4 592 aaPredicted RBP18.54■□□□□ 0.56
IKBKB-228ENST00000523517 ARMC2Q8NEN0 867 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 CFAP61Q8NHU2 1237 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 FAM167BQ9BTA0 163 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 SLC13A1Q9BZW2 595 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 MKS1Q9NXB0 559 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 TAS2R1Q9NYW7 299 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 IRF6O14896 467 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 MDM4O15151 490 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 SMNDC1O75940 238 aaKnown RBP eCLIP18.54■□□□□ 0.56
IKBKB-228ENST00000523517 KRT38O76015 456 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 MAGEA3P43357 314 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 BST1Q10588 318 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 BMPR2Q13873 1038 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 KCTD2Q14681 263 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 PPP1R26Q5T8A7 1209 aaPredicted RBP18.54■□□□□ 0.56
IKBKB-228ENST00000523517 ATG16L1Q676U5 607 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 C4orf22Q6V702 233 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 TEX9Q8N6V9 391 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 MCUR1Q96AQ8 359 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 E2F7Q96AV8 911 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 MTBPQ96DY7 904 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 ACAP3Q96P50 834 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 MMP19Q99542 508 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 SLC4A5Q9BY07 1137 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 NMUR2Q9GZQ4 415 aa18.54■□□□□ 0.56
IKBKB-228ENST00000523517 A0A0G2JLL6 359 aaPredicted RBP18.53■□□□□ 0.56
IKBKB-228ENST00000523517 METTL18O95568 372 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 CSH1P0DML2 217 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 CSH2P0DML3 217 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 ATP6V1C1P21283 382 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 TMPRSS15P98073 1019 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 Q3C1V9 767 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 PKDCCQ504Y2 493 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 PPP6R3Q5H9R7 873 aaPredicted RBP18.53■□□□□ 0.56
IKBKB-228ENST00000523517 PRRT2Q7Z6L0 340 aaPredicted RBP18.53■□□□□ 0.56
IKBKB-228ENST00000523517 TMEM110Q86TL2 294 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 ALYREFQ86V81 257 aaKnown RBP18.53■□□□□ 0.56
IKBKB-228ENST00000523517 TTC30AQ86WT1 665 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 SCUBE3Q8IX30 993 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 LINC01465Q8N7H1 131 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 NRDE2Q9H7Z3 1164 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 SIRPGQ9P1W8 387 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 AKT3Q9Y243 479 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 LRRC37A2A6NM11 1700 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 RARBP10826 455 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 CYP2F1P24903 491 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 HDAC4P56524 1084 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 TTLL4Q14679 1199 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 KPNB1Q14974 876 aaKnown RBP18.53■□□□□ 0.56
IKBKB-228ENST00000523517 ZNF534Q76KX8 674 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 GSDMBQ8TAX9 411 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 SIGLEC10Q96LC7 697 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 EBNA1BP2Q99848 306 aaKnown RBP18.53■□□□□ 0.56
IKBKB-228ENST00000523517 TRIM6Q9C030 488 aaPredicted RBP18.53■□□□□ 0.56
IKBKB-228ENST00000523517 MMADHCQ9H3L0 296 aaPredicted RBP18.53■□□□□ 0.56
IKBKB-228ENST00000523517 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.53■□□□□ 0.561e-91■■■■■ 230.9
IKBKB-228ENST00000523517 ARMCX1Q9P291 453 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 RBPJLQ9UBG7 517 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 STOML1Q9UBI4 398 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 MAD1L1Q9Y6D9 718 aa18.53■□□□□ 0.56
IKBKB-228ENST00000523517 ANK1P16157 1881 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 FAM159BA6NKW6 160 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 ZNF487B1APH4 448 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 GCATO75600 419 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 VTNP04004 478 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 DESP17661 470 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 CHI3L2Q15782 390 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 HSF5Q4G112 596 aaPredicted RBP18.52■□□□□ 0.56
IKBKB-228ENST00000523517 ACSBG2Q5FVE4 666 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 CES4AQ5XG92 561 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 TRMT10BQ6PF06 316 aaKnown RBP18.52■□□□□ 0.56
IKBKB-228ENST00000523517 ACOT1Q86TX2 421 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 SESTD1Q86VW0 696 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 MICAL1Q8TDZ2 1067 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 AFG1LQ8WV93 481 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 KIF12Q96FN5 646 aa18.52■□□□□ 0.56
IKBKB-228ENST00000523517 TRIM56Q9BRZ2 755 aaKnown RBP18.52■□□□□ 0.56
IKBKB-228ENST00000523517 CORO1CQ9ULV4 474 aaPredicted RBP18.52■□□□□ 0.56
IKBKB-228ENST00000523517 PAPSS1O43252 624 aaPredicted RBP18.52■□□□□ 0.55
IKBKB-228ENST00000523517 GABBR2O75899 941 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 SETSIPP0DME0 302 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 GCKP35557 465 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 OCRLQ01968 901 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 GBE1Q04446 702 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 NT5DC4Q86YG4 428 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 NUDCD3Q8IVD9 361 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 MPP5Q8N3R9 675 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 SLC35F5Q8WV83 523 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 DNAJC9Q8WXX5 260 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 MRPL45Q9BRJ2 306 aaKnown RBP18.52■□□□□ 0.55
IKBKB-228ENST00000523517 ARHGEF4Q9NR80 690 aa18.52■□□□□ 0.55
IKBKB-228ENST00000523517 SRCAPQ6ZRS2 3230 aa18.51■□□□□ 0.55
IKBKB-228ENST00000523517 HMX2A2RU54 273 aa18.51■□□□□ 0.55
IKBKB-228ENST00000523517 CYB561D2O14569 222 aa18.51■□□□□ 0.55
IKBKB-228ENST00000523517 TPSB2P20231 275 aa18.51■□□□□ 0.55
IKBKB-228ENST00000523517 RCN1Q15293 331 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms