RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 APOBEC3HQ6NTF7 200 aaKnown RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 C4orf19Q8IY42 314 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 CERS5Q8N5B7 392 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 MMP19Q99542 508 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ZNF341Q9BYN7 854 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 DRC3Q9H069 523 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 DHX35Q9H5Z1 703 aaKnown RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 KANSL3Q9P2N6 904 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 FETUBQ9UGM5 382 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 SSX2IPQ9Y2D8 614 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 COQ4Q9Y3A0 265 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 SH3BP1Q9Y3L3 701 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 LSM8O95777 96 aaKnown RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 CCDC166P0CW27 439 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 IMPDH2P12268 514 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 COX4I1P13073 169 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 P4HA1P13674 534 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 MMP8P22894 467 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 TMED10P49755 219 aaKnown RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 SLC12A2P55011 1212 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 RC3H1Q5TC82 1133 aaKnown RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ANGEL2Q5VTE6 544 aaKnown RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 LRRC8EQ6NSJ5 796 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 DPY19L2Q6NUT2 758 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 GPR141Q7Z602 305 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 LRRN4Q8WUT4 740 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 MFSD14AQ96MC6 490 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 BTBD9Q96Q07 612 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 PAIP1Q9H074 479 aaKnown RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 AGO4Q9HCK5 861 aaKnown RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 PIH1D1Q9NWS0 290 aaKnown RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 PSMD13Q9UNM6 376 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 PLA2G4CQ9UP65 541 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 PHF24Q9UPV7 400 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 SNX13Q9Y5W8 968 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 DDX60Q8IY21 1712 aaKnown RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 TTC36A6NLP5 189 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 E5RJQ4 531 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 INO80B-WBP1J3KQ70 363 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 NFIBO00712 420 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 SIN3BO75182 1162 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 CPA3P15088 417 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 SDC4P31431 198 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 MYL6P60660 151 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 HPCAP84074 193 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 IFRD2Q12894 506 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 C6orf52Q5T4I8 152 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 KLHDC10Q6PID8 442 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ARCQ7LC44 396 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 CLVS1Q8IUQ0 354 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ZNF786Q8N393 782 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 FBXW8Q8N3Y1 598 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 PDZD8Q8NEN9 1154 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 TSPAN14Q8NG11 270 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ZSCAN18Q8TBC5 510 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ZBTB45Q96K62 511 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 TMEM79Q9BSE2 394 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 INO80BQ9C086 356 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 MTMR12Q9C0I1 747 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 TCF7L2Q9NQB0 619 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 GTSE1Q9NYZ3 720 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 NUB1Q9Y5A7 615 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 BCORQ6W2J9 1755 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ATRNL1Q5VV63 1379 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 TP73O15350 636 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ZNF862O60290 1169 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 PENKP01210 267 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 MIPP30301 263 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ALDH1B1P30837 517 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 PRKCEQ02156 737 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 CBX3Q13185 183 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 MMRN1Q13201 1228 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 LPIN1Q14693 890 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 UGCGQ16739 394 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 VWA5B1Q5TIE3 1220 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 KYAT3Q6YP21 454 aaKnown RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 AMIGO2Q86SJ2 522 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 NAT8LQ8N9F0 302 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 BHLHE22Q8NFJ8 381 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 APBB2Q92870 758 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ZNF668Q96K58 619 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 TAAR1Q96RJ0 339 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 SEMA6AQ9H2E6 1030 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 RNPEPQ9H4A4 650 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 TIMMDC1Q9NPL8 285 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 RRN3Q9NYV6 651 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 C6orf203Q9P0P8 240 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-212ENST00000523387 HESX1Q9UBX0 185 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 FBXO40Q9UH90 709 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 ITGA11Q9UKX5 1188 aa9.32□□□□□ -0.92
CSMD1-212ENST00000523387 TRDMT1O14717 391 aaKnown RBP9.31□□□□□ -0.92
CSMD1-212ENST00000523387 AKAP10O43572 662 aa9.31□□□□□ -0.92
CSMD1-212ENST00000523387 RBL1P28749 1068 aa9.31□□□□□ -0.92
CSMD1-212ENST00000523387 CCND2P30279 289 aa9.31□□□□□ -0.92
CSMD1-212ENST00000523387 ARL4AP40617 200 aa9.31□□□□□ -0.92
CSMD1-212ENST00000523387 NUP107P57740 925 aa9.31□□□□□ -0.92
CSMD1-212ENST00000523387 MAP3K10Q02779 954 aa9.31□□□□□ -0.92
CSMD1-212ENST00000523387 C15orf52Q6ZUT6 534 aaKnown RBP9.31□□□□□ -0.92
CSMD1-212ENST00000523387 SP8Q8IXZ3 490 aa9.31□□□□□ -0.92
CSMD1-212ENST00000523387 OCEL1Q9H607 264 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms