RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 ZNF34Q8IZ26 560 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 TMEM39BQ9GZU3 492 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 DDX20Q9UHI6 824 aaKnown RBP11.71□□□□□ -0.53
LAMA4-219ENST00000522006 SCAF8Q9UPN6 1271 aaKnown RBP11.71□□□□□ -0.53
LAMA4-219ENST00000522006 OGTO15294 1046 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 CSF1RP07333 972 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 MBL2P11226 248 aaPredicted RBP11.71□□□□□ -0.53
LAMA4-219ENST00000522006 ATP1A4Q13733 1029 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 TYW3Q6IPR3 259 aaKnown RBP11.71□□□□□ -0.53
LAMA4-219ENST00000522006 TLK2Q86UE8 772 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 CYP4Z2PQ8N1L4 340 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 GPRC5AQ8NFJ5 357 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 EXD1Q8NHP7 514 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 FBXO32Q969P5 355 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 ATG4CQ96DT6 458 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 ZFYVE28Q9HCC9 887 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 ARHGEF3Q9NR81 526 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 NCKIPSDQ9NZQ3 722 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 KLHL3Q9UH77 587 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 CYB561D2O14569 222 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 GAS2O43903 313 aaKnown RBP11.71□□□□□ -0.53
LAMA4-219ENST00000522006 H2AFXP16104 143 aaPredicted RBP11.71□□□□□ -0.53
LAMA4-219ENST00000522006 TALDO1P37837 337 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 C1DQ13901 141 aaKnown RBP11.71□□□□□ -0.53
LAMA4-219ENST00000522006 DDR2Q16832 855 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 COLGALT1Q8NBJ5 622 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 ST13P5Q8NFI4 369 aaPredicted RBP11.71□□□□□ -0.53
LAMA4-219ENST00000522006 SERHL2Q9H4I8 314 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 SERHLQ9NQF3 203 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 MAN1C1Q9NR34 630 aa11.71□□□□□ -0.53
LAMA4-219ENST00000522006 STAU1O95793 577 aaKnown RBP11.71□□□□□ -0.54
LAMA4-219ENST00000522006 NAMPTP43490 491 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 ITGA9Q13797 1035 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 DGKKQ5KSL6 1271 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 ZNF571Q7Z3V5 609 aaPredicted RBP11.71□□□□□ -0.54
LAMA4-219ENST00000522006 PTAR1Q7Z6K3 402 aaPredicted RBP11.71□□□□□ -0.54
LAMA4-219ENST00000522006 MIB1Q86YT6 1006 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 MRPL48Q96GC5 212 aaKnown RBP11.71□□□□□ -0.54
LAMA4-219ENST00000522006 ACOX2Q99424 681 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 VANGL2Q9ULK5 521 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 F8VZ95 297 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 H7C4K7 107 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 HALP42357 657 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 GIT2Q14161 759 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 SEPHS2Q99611 448 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 PRRG3Q9BZD7 231 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 ZNF518BQ9C0D4 1074 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 RGS18Q9NS28 235 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 UTP6Q9NYH9 597 aaKnown RBP11.71□□□□□ -0.54
LAMA4-219ENST00000522006 INO80Q9ULG1 1556 aaPredicted RBP11.71□□□□□ -0.54
LAMA4-219ENST00000522006 DUSP12Q9UNI6 340 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 ACOT9Q9Y305 439 aa11.71□□□□□ -0.54
LAMA4-219ENST00000522006 RIPK2O43353 540 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 ENDOD1O94919 500 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 ITGALP20701 1170 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 BCAT1P54687 386 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 MPP3Q13368 585 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 PTPAQ15257 358 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 INAQ16352 499 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 CCNG2Q16589 344 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 TRMT5Q32P41 509 aaKnown RBP11.7□□□□□ -0.54
LAMA4-219ENST00000522006 PRR5LQ6MZQ0 368 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 TMC5Q6UXY8 1006 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 DPP10Q8N608 796 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 KYQ8NBH2 561 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 FBXO25Q8TCJ0 367 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 MAGED4Q96JG8 741 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 CBWD1Q9BRT8 395 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 SNX8Q9Y5X2 465 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 ZC3H11AO75152 810 aaKnown RBP eCLIP11.7□□□□□ -0.54
LAMA4-219ENST00000522006 PROSCO94903 275 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 ICAM1P05362 532 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 GHRP10912 638 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 SLC2A4P14672 509 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 RRM1P23921 792 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 YY1P25490 414 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 ZNF157P51786 506 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-219ENST00000522006 CSNK2BP67870 215 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 BFSP2Q13515 415 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 PCNX4Q63HM2 1172 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 VMP1Q96GC9 406 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 C6orf62Q9GZU0 229 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-219ENST00000522006 NT5MQ9NPB1 228 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 NAALADL1Q9UQQ1 740 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 DNALI1O14645 258 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-219ENST00000522006 CAMTA2O94983 1202 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 CYP2F1P24903 491 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 FASP25445 335 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 MAGEA10P43363 369 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-219ENST00000522006 FAM98BQ52LJ0 330 aaKnown RBP11.7□□□□□ -0.54
LAMA4-219ENST00000522006 UTP15Q8TED0 518 aaKnown RBP11.7□□□□□ -0.54
LAMA4-219ENST00000522006 BTBD10Q9BSF8 475 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 COLEC11Q9BWP8 271 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 PIPSLA2A3N6 862 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 WASHC2DQ5SRD0 308 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 N4BP2L1Q5TBK1 243 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-219ENST00000522006 FAM45BPQ6NSW5 357 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 ANKZF1Q9H8Y5 726 aa11.7□□□□□ -0.54
LAMA4-219ENST00000522006 AVENQ9NQS1 362 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms