RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 SCD5Q86SK9 330 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 YAF2Q8IY57 180 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 ZNF276Q8N554 614 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 CSGALNACT1Q8TDX6 532 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 CPLX3Q8WVH0 158 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 MRPS31Q92665 395 aaKnown RBP19.05■□□□□ 0.64
VEGFA-222ENST00000520948 MRFAP1L1Q96HT8 127 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 GCNAQ96QF7 691 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 FAM126AQ9BYI3 521 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-222ENST00000520948 NUCKS1Q9H1E3 243 aaKnown RBP19.05■□□□□ 0.64
VEGFA-222ENST00000520948 LRRC4Q9HBW1 653 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 PARD6AQ9NPB6 346 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 GMIPQ9P107 970 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 GMEB2Q9UKD1 530 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 LUC7L2Q9Y383 392 aaKnown RBP19.05■□□□□ 0.64
VEGFA-222ENST00000520948 MYO16Q9Y6X6 1858 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 C2orf78A6NCI8 922 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 OLFM2O95897 454 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 ZBED1O96006 694 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 OAS1P00973 400 aaKnown RBP19.04■□□□□ 0.64
VEGFA-222ENST00000520948 USP17L7P0C7H9 530 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 PFKLP17858 780 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 ACADSBP45954 432 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 CCR3P51677 355 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 ARID5AQ03989 594 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 ADIGQ0VDE8 80 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 GAS6Q14393 721 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 PASD1Q8IV76 773 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 CMTM8Q8IZV2 173 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 GPR161Q8N6U8 529 aaKnown RBP19.04■□□□□ 0.64
VEGFA-222ENST00000520948 MAB21L3Q8N8X9 362 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 TTC8Q8TAM2 541 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 PCDHB18PQ96TA0 734 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 ULBP1Q9BZM6 244 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 NMUR1Q9HB89 426 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 CNGB3Q9NQW8 809 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 RBM12Q9NTZ6 932 aaKnown RBP19.04■□□□□ 0.64
VEGFA-222ENST00000520948 OSER1Q9NX31 292 aa19.04■□□□□ 0.64
VEGFA-222ENST00000520948 CDV3Q9UKY7 258 aaKnown RBP19.04■□□□□ 0.64
VEGFA-222ENST00000520948 KIF26AQ9ULI4 1882 aaPredicted RBP19.04■□□□□ 0.64
VEGFA-222ENST00000520948 LSM8O95777 96 aaKnown RBP19.03■□□□□ 0.64
VEGFA-222ENST00000520948 CHRNB1P11230 501 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 TGM1P22735 817 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 HNRNPH3P31942 346 aaKnown RBP19.03■□□□□ 0.64
VEGFA-222ENST00000520948 TUBP50607 506 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 KPNA1P52294 538 aaPredicted RBP19.03■□□□□ 0.64
VEGFA-222ENST00000520948 ATXN1P54253 815 aaKnown RBP19.03■□□□□ 0.64
VEGFA-222ENST00000520948 DAOAP59103 153 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 LMNB2Q03252 620 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 DMWDQ09019 674 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 PDCLQ13371 301 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 TRIM14Q14142 442 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 PPP2R5DQ14738 602 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 HGSNATQ68CP4 663 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 PRR23BQ6ZRT6 265 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 TMEM35BQ8NCS4 154 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 C1orf131Q8NDD1 294 aaKnown RBP19.03■□□□□ 0.64
VEGFA-222ENST00000520948 ZNF397Q8NF99 534 aaPredicted RBP19.03■□□□□ 0.64
VEGFA-222ENST00000520948 ZFYVE19Q96K21 471 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 SLC22A12Q96S37 553 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 CPXM1Q96SM3 734 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 CYP2S1Q96SQ9 504 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 AGPAT1Q99943 283 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 IER2Q9BTL4 223 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 RNF38Q9H0F5 515 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 TLR8Q9NR97 1041 aaKnown RBP19.03■□□□□ 0.64
VEGFA-222ENST00000520948 RAB23Q9ULC3 237 aa19.03■□□□□ 0.64
VEGFA-222ENST00000520948 A0A1W2PQH9 124 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 UNGP13051 313 aaPredicted RBP19.02■□□□□ 0.64
VEGFA-222ENST00000520948 LCP1P13796 627 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 GABRB2P47870 512 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 PSEN1P49768 467 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 NRLP54845 237 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 NOMO3P69849 1222 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 SPEM2Q0P670 501 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 ASIC2Q16515 512 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 Q6ZS52 159 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 ARID3BQ8IVW6 561 aaPredicted RBP19.02■□□□□ 0.64
VEGFA-222ENST00000520948 IRGQQ8WZA9 623 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 NDRG1Q92597 394 aaKnown RBP19.02■□□□□ 0.64
VEGFA-222ENST00000520948 E2F7Q96AV8 911 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 PPP1R13BQ96KQ4 1090 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 HAUS4Q9H6D7 363 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.02■□□□□ 0.64
VEGFA-222ENST00000520948 CLIC5Q9NZA1 410 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 TJP2Q9UDY2 1190 aa19.02■□□□□ 0.64
VEGFA-222ENST00000520948 YJEFN3A6XGL0 299 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 CHURC1-FNTBB4DL54 471 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 E5RJQ4 531 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 E7ENQ6 273 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 PIK3R2O00459 728 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 CHADO15335 359 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 PAPSS1O43252 624 aaPredicted RBP19.01■□□□□ 0.63
VEGFA-222ENST00000520948 FBXO21O94952 628 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 CXCL12P48061 93 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 FNTBP49356 437 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 FCHO2Q0JRZ9 810 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 SRSF5Q13243 272 aaKnown RBP19.01■□□□□ 0.63
VEGFA-222ENST00000520948 PTPN20Q4JDL3 420 aa19.01■□□□□ 0.63
VEGFA-222ENST00000520948 TRIM72Q6ZMU5 477 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms