RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 TMEM63BQ5T3F8 832 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 ANO7Q6IWH7 933 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 DEF8Q6ZN54 512 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 DPY19L3Q6ZPD9 716 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 PIP4P1Q86T03 277 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 THOC3Q96J01 351 aaKnown RBP5.04□□□□□ -1.6
CLK4-207ENST00000520909 SPC25Q9HBM1 224 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 HEY2Q9UBP5 337 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 KNSTRNQ9Y448 316 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 HS3ST3B1Q9Y662 390 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.04□□□□□ -1.6
CLK4-207ENST00000520909 ZNF142P52746 1687 aaPredicted RBP5.04□□□□□ -1.6
CLK4-207ENST00000520909 TECPR2O15040 1411 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 FAM135BQ49AJ0 1406 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 DLC1Q96QB1 1528 aa5.04□□□□□ -1.6
CLK4-207ENST00000520909 VNN1O95497 513 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 CDK11BP21127 795 aaKnown RBP5.03□□□□□ -1.6
CLK4-207ENST00000520909 RECQLP46063 649 aaPredicted RBP5.03□□□□□ -1.6
CLK4-207ENST00000520909 UCP3P55916 312 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 SUMO2P61956 95 aaKnown RBP5.03□□□□□ -1.6
CLK4-207ENST00000520909 PSG6Q00889 435 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 TMEM65Q6PI78 240 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 LVRNQ6Q4G3 990 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 ANKRD13BQ86YJ7 626 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 LIX1LQ8IVB5 337 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLK4-207ENST00000520909 PNISRQ8TF01 805 aaKnown RBP5.03□□□□□ -1.6
CLK4-207ENST00000520909 MTFMTQ96DP5 389 aaKnown RBP5.03□□□□□ -1.6
CLK4-207ENST00000520909 CDK5RAP3Q96JB5 506 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 MESP1Q9BRJ9 268 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 SNX14Q9Y5W7 946 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 PIK3R4Q99570 1358 aa5.03□□□□□ -1.6
CLK4-207ENST00000520909 QRICH2Q9H0J4 1663 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 DIP2AQ14689 1571 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 B4DGG1 531 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 SMAD6O43541 496 aaKnown RBP5.02□□□□□ -1.61
CLK4-207ENST00000520909 PMPCBO75439 489 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 KCNA3P22001 575 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 GKP32189 559 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 COPB1P53618 953 aaKnown RBP5.02□□□□□ -1.61
CLK4-207ENST00000520909 PRKAG1P54619 331 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 WNT3P56703 355 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 CC2D1BQ5T0F9 858 aaKnown RBP5.02□□□□□ -1.61
CLK4-207ENST00000520909 RAB11FIP4Q86YS3 637 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 ARFGAP1Q8N6T3 406 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 C17orf80Q9BSJ5 609 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 FAM234AQ9H0X4 552 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 PRKRIP1Q9H875 184 aaPredicted RBP5.02□□□□□ -1.61
CLK4-207ENST00000520909 TERF2IPQ9NYB0 399 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 SPEF1Q9Y4P9 236 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 SETD1AO15047 1707 aaKnown RBP5.02□□□□□ -1.61
CLK4-207ENST00000520909 ARHGEF28Q8N1W1 1705 aaKnown RBP5.02□□□□□ -1.61
CLK4-207ENST00000520909 TULP4Q9NRJ4 1543 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 LMTK3Q96Q04 1460 aa5.02□□□□□ -1.61
CLK4-207ENST00000520909 KTN1Q86UP2 1357 aaKnown RBP5.01□□□□□ -1.61
CLK4-207ENST00000520909 CCER2I3L3R5 266 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 TULP3O75386 442 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 SNUPNO95149 360 aaKnown RBP5.01□□□□□ -1.61
CLK4-207ENST00000520909 T-ENOLP0DO92 83 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 SLC11A2P49281 568 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 RPS13P62277 151 aaKnown RBP5.01□□□□□ -1.61
CLK4-207ENST00000520909 MLC1Q15049 377 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 RALBP1Q15311 655 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 ZIK1Q3SY52 487 aaPredicted RBP5.01□□□□□ -1.61
CLK4-207ENST00000520909 TMTC4Q5T4D3 741 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 EGFLAMQ63HQ2 1017 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 DENND2CQ68D51 928 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 COLCA1Q6ZS62 124 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 ZNF548Q8NEK5 533 aaPredicted RBP5.01□□□□□ -1.61
CLK4-207ENST00000520909 PPP2R3CQ969Q6 453 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 ZFYVE19Q96K21 471 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 CNNM1Q9NRU3 951 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 MAFFQ9ULX9 164 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 MED16Q9Y2X0 877 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 PTCH1Q13635 1447 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 NINLQ9Y2I6 1382 aa5.01□□□□□ -1.61
CLK4-207ENST00000520909 CPS1P31327 1500 aa5□□□□□ -1.61
CLK4-207ENST00000520909 PRSS44E7EML9 344 aa5□□□□□ -1.61
CLK4-207ENST00000520909 CTSAP10619 480 aa5□□□□□ -1.61
CLK4-207ENST00000520909 CDKN2AP42771 156 aaKnown RBP5□□□□□ -1.61
CLK4-207ENST00000520909 LMAN2Q12907 356 aa5□□□□□ -1.61
CLK4-207ENST00000520909 DAB2IPQ5VWQ8 1189 aa5□□□□□ -1.61
CLK4-207ENST00000520909 RANBP10Q6VN20 620 aa5□□□□□ -1.61
CLK4-207ENST00000520909 PTCHD4Q6ZW05 846 aa5□□□□□ -1.61
CLK4-207ENST00000520909 C16orf71Q8IYS4 520 aaPredicted RBP5□□□□□ -1.61
CLK4-207ENST00000520909 TRMOQ9BU70 441 aa5□□□□□ -1.61
CLK4-207ENST00000520909 ZSCAN32Q9NX65 697 aa5□□□□□ -1.61
CLK4-207ENST00000520909 CPA4Q9UI42 421 aa5□□□□□ -1.61
CLK4-207ENST00000520909 PROCRQ9UNN8 238 aa5□□□□□ -1.61
CLK4-207ENST00000520909 POLR1AO95602 1720 aaPredicted RBP5□□□□□ -1.61
CLK4-207ENST00000520909 ANKRD36BQ8N2N9 1353 aa5□□□□□ -1.61
CLK4-207ENST00000520909 ALG1L2C9J202 215 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 CNOT3O75175 753 aaKnown RBP4.99□□□□□ -1.61
CLK4-207ENST00000520909 LARS2Q15031 903 aaKnown RBP4.99□□□□□ -1.61
CLK4-207ENST00000520909 AWAT1Q58HT5 328 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 UBAP2Q5T6F2 1119 aaKnown RBP4.99□□□□□ -1.61
CLK4-207ENST00000520909 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 CATIPQ7Z7H3 387 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 MORC1Q86VD1 984 aa4.99□□□□□ -1.61
CLK4-207ENST00000520909 GAS2L3Q86XJ1 694 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms