RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 DLDP09622 509 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 ATXN1LP0C7T5 689 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 PHKG2P15735 406 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 HOXD9P28356 352 aaPredicted RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 PHKA1P46020 1223 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 GPSM2P81274 684 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 KIF23Q02241 960 aaPredicted RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 GHRHRQ02643 423 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 SEMA3AQ14563 771 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 ACAP2Q15057 778 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 MTHFSDQ2M296 383 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 CCDC30Q5VVM6 783 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 CCDC146Q8IYE0 955 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 C3orf20Q8ND61 904 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 ATG4AQ8WYN0 398 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 GLG1Q92896 1179 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 CUL5Q93034 780 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 FAXDC2Q96IV6 333 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 SLC46A1Q96NT5 459 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 LENG8Q96PV6 779 aaPredicted RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 PPP1R10Q96QC0 940 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 PLEKHF1Q96S99 279 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 PUS7LQ9H0K6 701 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 FOXP1Q9H334 677 aaPredicted RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 WDCPQ9H6R7 721 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 GLOD4Q9HC38 313 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 SLAMF7Q9NQ25 335 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 MKS1Q9NXB0 559 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 DBF4Q9UBU7 674 aaPredicted RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 POLHQ9Y253 713 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 PCDHGA9Q9Y5G4 932 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 PCDHGA8Q9Y5G5 932 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 PCDHGA7Q9Y5G6 932 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 PCDHGA6Q9Y5G7 932 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 PCDHGA3Q9Y5H0 932 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 CAMTA1Q9Y6Y1 1673 aa2.28□□□□□ -2.05
CCNC-208ENST00000519617 BCL9LQ86UU0 1499 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 TNS2Q63HR2 1409 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 KIF16BQ96L93 1317 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 EME2A4GXA9 379 aaPredicted RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 PRSS44E7EML9 344 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 M0QYG6 137 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 FZD9O00144 591 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 ADAM10O14672 748 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 NPHP1O15259 732 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 RNMTO43148 476 aaKnown RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 PDE8BO95263 885 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 GNAI2P04899 355 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 PIM1P11309 404 aaPredicted RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 PXNP49023 591 aaPredicted RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 HTR6P50406 440 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 RENBPP51606 427 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 TPTEP56180 551 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 LOXL3P58215 753 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 KRT85P78386 507 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 NEXNQ0ZGT2 675 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 HYAL1Q12794 435 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 ZNF268Q14587 947 aaPredicted RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 NPY5RQ15761 445 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 FAM187BQ17R55 369 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 ALDH1L2Q3SY69 923 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 LONRF3Q496Y0 759 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 HSP90AB3PQ58FF7 597 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 UBAP2Q5T6F2 1119 aaKnown RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 ARHGAP40Q5TG30 622 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 ZNF790Q6PG37 636 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 LAYNQ6UX15 382 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 KIF6Q6ZMV9 814 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 DEF8Q6ZN54 512 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 Q6ZTC4 211 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 NOP9Q86U38 636 aaKnown RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 FTSJ3Q8IY81 847 aaKnown RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 CNTD1Q8N815 330 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 FAM46DQ8NEK8 389 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 ADAMTS18Q8TE60 1221 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 XAGE5Q8WWM1 108 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 SOCS4Q8WXH5 440 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 R3HDM4Q96D70 268 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 SIGLEC11Q96RL6 698 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 CTAGE1Q96RT6 745 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 API5Q9BZZ5 524 aaKnown RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 TMX4Q9H1E5 349 aaPredicted RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 MRPL46Q9H2W6 279 aaKnown RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 HIPK2Q9H2X6 1198 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.27□□□□□ -2.05
CCNC-208ENST00000519617 POT1Q9NUX5 634 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 HYPKQ9NX55 129 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 SERPINB13Q9UIV8 391 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 ABCA3Q99758 1704 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 PLCH1Q4KWH8 1693 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 LMO7Q8WWI1 1683 aa2.27□□□□□ -2.05
CCNC-208ENST00000519617 COL18A1P39060 1754 aa2.26□□□□□ -2.05
CCNC-208ENST00000519617 CEMIPQ8WUJ3 1361 aa2.26□□□□□ -2.05
CCNC-208ENST00000519617 ZMYM2Q9UBW7 1377 aa2.26□□□□□ -2.05
CCNC-208ENST00000519617 CRYBG1Q9Y4K1 1723 aa2.26□□□□□ -2.05
CCNC-208ENST00000519617 PTPRCP08575 1304 aa2.26□□□□□ -2.05
CCNC-208ENST00000519617 LRRC14BA6NHZ5 514 aa2.26□□□□□ -2.05
CCNC-208ENST00000519617 BTBD19C9JJ37 291 aa2.26□□□□□ -2.05
CCNC-208ENST00000519617 TMEM232C9JQI7 657 aa2.26□□□□□ -2.05
CCNC-208ENST00000519617 GTPBP1O00178 669 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms