RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CAPN15O75808 1086 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 SOAT2O75908 522 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 TJP3O95049 919 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 SYF2O95926 243 aaKnown RBP15.11■□□□□ 0.01
CLN8-204ENST00000519254 KDELR1P24390 212 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 SCNN1AP37088 669 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 ACADSBP45954 432 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 GPS2Q13227 327 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 GPR17Q13304 367 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 SLC26A9Q7LBE3 791 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 SIX6OS1Q8N1H7 587 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 ATL2Q8NHH9 583 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 SEPT5Q99719 369 aaPredicted RBP15.11■□□□□ 0.01
CLN8-204ENST00000519254 ZBP1Q9H171 429 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 YBX2Q9Y2T7 364 aaKnown RBP15.11■□□□□ 0.01
CLN8-204ENST00000519254 RWDD3Q9Y3V2 267 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 GOLGA6BA6NDN3 693 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 GGCXP38435 758 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 GPR15P49685 360 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 TKTL1P51854 596 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 IFRD2Q12894 506 aaPredicted RBP15.11■□□□□ 0.01
CLN8-204ENST00000519254 MGAT5BQ3V5L5 792 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 ODF2Q5BJF6 829 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 SDHAF4Q5VUM1 108 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 ALS2CLQ60I27 953 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 SLC8B1Q6J4K2 584 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 TMC7Q7Z402 723 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 IQCKQ8N0W5 287 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 STKLD1Q8NE28 680 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 NDRG1Q92597 394 aaKnown RBP15.11■□□□□ 0.01
CLN8-204ENST00000519254 FUBP3Q96I24 572 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLN8-204ENST00000519254 CSNK1G1Q9HCP0 422 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 ENTPD7Q9NQZ7 604 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 EFR3BQ9Y2G0 817 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 NEU2Q9Y3R4 380 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 PCDHA11Q9Y5I1 949 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.1■□□□□ 0.01
CLN8-204ENST00000519254 VNN2O95498 520 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 CD48P09326 243 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 NDUFV1P49821 464 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 ATP11AP98196 1134 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 ADCY1Q08828 1119 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 PTK6Q13882 451 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 PPP1R7Q15435 360 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 DDR2Q16832 855 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 CDO1Q16878 200 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 SYDE1Q6ZW31 735 aaPredicted RBP15.1■□□□□ 0.01
CLN8-204ENST00000519254 ARCQ7LC44 396 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 GRK7Q8WTQ7 553 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 KCTD13Q8WZ19 329 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 TCF25Q9BQ70 676 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 C11orf84Q9BUA3 381 aaPredicted RBP15.1■□□□□ 0.01
CLN8-204ENST00000519254 CRISPLD1Q9H336 500 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 CERS4Q9HA82 394 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 MED4Q9NPJ6 270 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 STK39Q9UEW8 545 aa15.1■□□□□ 0.01
CLN8-204ENST00000519254 FEZ2Q9UHY8 353 aaPredicted RBP15.1■□□□□ 0.01
CLN8-204ENST00000519254 HHLA1C9JL84 531 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 LIASO43766 372 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 ENDOD1O94919 500 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 CTSAP10619 480 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 TFE3P19532 575 aaPredicted RBP15.09■□□□□ 0.01
CLN8-204ENST00000519254 IVDP26440 423 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 SDC4P31431 198 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 ARSEP51690 589 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 PLTPP55058 493 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 DUSP4Q13115 394 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 UAP1Q16222 522 aaPredicted RBP15.09■□□□□ 0.01
CLN8-204ENST00000519254 PLPP4Q5VZY2 271 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 DRICH1Q6PGQ1 229 aaPredicted RBP15.09■□□□□ 0.01
CLN8-204ENST00000519254 TMC3Q7Z5M5 1100 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 KCTD6Q8NC69 237 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 FBXO25Q8TCJ0 367 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 SPPL2BQ8TCT7 592 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 GPR152Q8TDT2 470 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 FAM172AQ8WUF8 416 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 POF1BQ8WVV4 589 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 HSPH1Q92598 858 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 FMO2Q99518 471 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 ADAM33Q9BZ11 813 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 TXLNGYQ9BZA5 131 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 ULBP1Q9BZM6 244 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 DNPEPQ9ULA0 475 aa15.09■□□□□ 0.01
CLN8-204ENST00000519254 TRIM66O15016 1216 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 POLR3GO15318 223 aaPredicted RBP15.08■□□□□ 0.01
CLN8-204ENST00000519254 TP73O15350 636 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 TEX28O15482 410 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 CXCL14O95715 111 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 DNAJB1P25685 340 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 GBP1P32455 592 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 PTPN9P43378 593 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 ERVFC1P60507 584 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 FAM193AP78312 1265 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 SMARCB1Q12824 385 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 VSTM1Q6UX27 236 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 FAM71BQ8TC56 605 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 CENPIQ92674 756 aaPredicted RBP15.08■□□□□ 0.01
CLN8-204ENST00000519254 ART4Q93070 314 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 LRRC45Q96CN5 670 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 ZIM3Q96PE6 472 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms