RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 CENPCQ03188 943 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 ARID5AQ03989 594 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 TAF10Q12962 218 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 CLEC16AQ2KHT3 1053 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 SGO2Q562F6 1265 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 ARHGAP17Q68EM7 881 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 LCLAT1Q6UWP7 414 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 ARCQ7LC44 396 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 SLFN11Q7Z7L1 901 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 NOP9Q86U38 636 aaKnown RBP7.97□□□□□ -1.13
SDCBP-206ENST00000519115 SLC47A2Q86VL8 602 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 CMTM8Q8IZV2 173 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 SIX5Q8N196 739 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 NUP93Q8N1F7 819 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 RBBP8NLQ8NC74 664 aaPredicted RBP7.97□□□□□ -1.13
SDCBP-206ENST00000519115 TMEM35BQ8NCS4 154 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 MSANTD4Q8NCY6 345 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 OLIG1Q8TAK6 271 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 CTNNBL1Q8WYA6 563 aaPredicted RBP7.97□□□□□ -1.13
SDCBP-206ENST00000519115 RFFLQ8WZ73 363 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 TFAP2BQ92481 460 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 SECISBP2LQ93073 1101 aaKnown RBP7.97□□□□□ -1.13
SDCBP-206ENST00000519115 ELSPBP1Q96BH3 223 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 LRRC3BQ96PB8 259 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 SLITRK1Q96PX8 696 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 LRFN3Q9BTN0 628 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 MRPL47Q9HD33 250 aaKnown RBP7.97□□□□□ -1.13
SDCBP-206ENST00000519115 TRMT1Q9NXH9 659 aaKnown RBP7.97□□□□□ -1.13
SDCBP-206ENST00000519115 TRPM5Q9NZQ8 1165 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 GMIPQ9P107 970 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 WDR35Q9P2L0 1181 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 AJAP1Q9UKB5 411 aaPredicted RBP7.97□□□□□ -1.13
SDCBP-206ENST00000519115 STRIP2Q9ULQ0 834 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 CCL26Q9Y258 94 aa7.97□□□□□ -1.13
SDCBP-206ENST00000519115 TRAV19A0A0A6YYK7 116 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 CTAGE9A4FU28 777 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 KRBA1A5PL33 1030 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 USP27XA6NNY8 438 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 PRR33A8MZF0 331 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 HHLA1C9JL84 531 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 TULP2O00295 520 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 O00370 1275 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 TNFRSF10BO14763 440 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 GPR37L1O60883 481 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 RTN3O95197 1032 aaPredicted RBP7.96□□□□□ -1.14
SDCBP-206ENST00000519115 CALB1P05937 261 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 CKMP06732 381 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 DDX6P26196 483 aaKnown RBP eCLIP7.96□□□□□ -1.14
SDCBP-206ENST00000519115 GDI1P31150 447 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 SCNN1AP37088 669 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 AVPR1AP37288 418 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 USP8P40818 1118 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 GABRB2P47870 512 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 RPL34P49207 117 aaKnown RBP7.96□□□□□ -1.14
SDCBP-206ENST00000519115 PGFP49763 221 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 GALCP54803 685 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 GNG11P61952 73 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 ZNF268Q14587 947 aaPredicted RBP7.96□□□□□ -1.14
SDCBP-206ENST00000519115 ACAP1Q15027 740 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 PAPD7Q5XG87 772 aaKnown RBP7.96□□□□□ -1.14
SDCBP-206ENST00000519115 MON1AQ86VX9 555 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 TTC30AQ86WT1 665 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 ZDHHC17Q8IUH5 632 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 ARL14EPQ8N8R7 260 aaPredicted RBP7.96□□□□□ -1.14
SDCBP-206ENST00000519115 ACRBPQ8NEB7 543 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 RIN3Q8TB24 985 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 UBA3Q8TBC4 463 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 USP13Q92995 863 aaPredicted RBP7.96□□□□□ -1.14
SDCBP-206ENST00000519115 PBXIP1Q96AQ6 731 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 ZFYVE19Q96K21 471 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 CEP295NLQ96MC4 621 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 CYP2S1Q96SQ9 504 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 NCAPGQ9BPX3 1015 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 ZSWIM1Q9BR11 485 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 DESI2Q9BSY9 194 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 TRMT61BQ9BVS5 477 aaKnown RBP7.96□□□□□ -1.14
SDCBP-206ENST00000519115 DUSP16Q9BY84 665 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 LACRTQ9GZZ8 138 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 MFSD1Q9H3U5 465 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 BRD9Q9H8M2 597 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 L2HGDHQ9H9P8 463 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 TRPV4Q9HBA0 871 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 CSNK1G1Q9HCP0 422 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 ARHGEF3Q9NR81 526 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 SLC2A4RGQ9NR83 387 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 EHD2Q9NZN4 543 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 TSPAN16Q9UKR8 245 aa7.96□□□□□ -1.14
SDCBP-206ENST00000519115 ZNF840PA6NDX5 716 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 M0QYV0 167 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 SCAMP3O14828 347 aaKnown RBP7.95□□□□□ -1.14
SDCBP-206ENST00000519115 USP17L7P0C7H9 530 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 PNMA6AP0CW24 399 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-206ENST00000519115 PSMC3P17980 439 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 MMP8P22894 467 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 CASQ1P31415 396 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 NSFP46459 744 aaKnown RBP7.95□□□□□ -1.14
SDCBP-206ENST00000519115 BCAT1P54687 386 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 SLC8A3P57103 927 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 PDE4CQ08493 712 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 DNTTIP2Q5QJE6 756 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms