RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 ARFGEF1Q9Y6D6 1849 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 MON2Q7Z3U7 1717 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 RNF123Q5XPI4 1314 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 H7C1Q1 480 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 EXOC3O60645 756 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 SOAT2O75908 522 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 CHRM5P08912 532 aaPredicted RBP3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 CPEP16870 476 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 HOXD9P28356 352 aaPredicted RBP3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 WASP42768 502 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 FXR1P51114 621 aaKnown RBP eCLIP3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 CLCN2P51788 898 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 HUNKP57058 714 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 HILS1P60008 231 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TREML2Q5T2D2 321 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 VPS53Q5VIR6 699 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 SDE2Q6IQ49 451 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 PRR5LQ6MZQ0 368 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TAF2Q6P1X5 1199 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 COLCA1Q6ZS62 124 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 SMIM5Q71RC9 77 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 KRT26Q7Z3Y9 468 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 NBPF5PQ86XG9 351 aaPredicted RBP3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 SPATS2Q86XZ4 545 aaKnown RBP3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 PSD4Q8NDX1 1056 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 WDR66Q8TBY9 1149 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 COG1Q8WTW3 980 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 DCPSQ96C86 337 aaKnown RBP3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 SERHLQ9NQF3 203 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TDP1Q9NUW8 608 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 RNF186Q9NXI6 227 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 SRP68Q9UHB9 627 aaKnown RBP3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 GPR45Q9Y5Y3 372 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 KIAA1551Q9HCM1 1747 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TOGARAM1Q9Y4F4 1720 aa3.56□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TRIM75PA6NK02 468 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 E9PLN8 166 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 PPM1GO15355 546 aaPredicted RBP3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 SLC16A3O15427 465 aaKnown RBP3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TLR5O60602 858 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 WDHD1O75717 1129 aaPredicted RBP3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 BBOX1O75936 387 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 ANXA1P04083 346 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 IL6RP08887 468 aaPredicted RBP3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 CHRM3P20309 590 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 LIPAP38571 399 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 ME1P48163 572 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 ZNF91Q05481 1191 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 CRY2Q49AN0 593 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 CT47A1Q5JQC4 288 aaPredicted RBP3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 RFX6Q8HWS3 928 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 MMS19Q96T76 1030 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 VKORC1Q9BQB6 163 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 RTFDC1Q9BY42 306 aaPredicted RBP3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TRMT13Q9NUP7 481 aaKnown RBP3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 UBR3Q6ZT12 1888 aa3.55□□□□□ -1.84
ATP6V1C1-204ENST00000518959 RIC1Q4ADV7 1423 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 IBTKQ9P2D0 1353 aaPredicted RBP3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 SCN4AP35499 1836 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TUBGCP6Q96RT7 1819 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 ZNF541Q9H0D2 1346 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 ERVV-1B6SEH8 477 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 VPS4BO75351 444 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TOMM40O96008 361 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TNFRSF1BP20333 461 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 NF2P35240 595 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TM4SF4P48230 202 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 PRMT2P55345 433 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 GPSM2P81274 684 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 KIF23Q02241 960 aaPredicted RBP3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 KLF1Q13351 362 aaPredicted RBP3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 RNF219Q5W0B1 726 aaPredicted RBP3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 ZNF813Q6ZN06 617 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 PARS2Q7L3T8 475 aaKnown RBP3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 MAVSQ7Z434 540 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 NRG4Q8WWG1 115 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 RBM17Q96I25 401 aaKnown RBP3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TESK2Q96S53 571 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 EFHD1Q9BUP0 239 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 FSD1LQ9BXM9 530 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 FAM126AQ9BYI3 521 aaPredicted RBP3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 GBA2Q9HCG7 927 aaPredicted RBP3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 POLKQ9UBT6 870 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 INTUQ9ULD6 942 aa3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TMA7Q9Y2S6 64 aaKnown RBP3.54□□□□□ -1.84
ATP6V1C1-204ENST00000518959 IFITM10A6NMD0 228 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 IGKV3-20P01619 116 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 LPOP22079 712 aaPredicted RBP3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 EPS15P42566 896 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TEFQ10587 303 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TARDBPQ13148 414 aaKnown RBP eCLIP3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 EIF4A2Q14240 407 aaKnown RBP3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 INAVAQ3KP66 663 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TBC1D9BQ66K14 1250 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 ZNF790Q6PG37 636 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 KIRREL2Q6UWL6 708 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 GADL1Q6ZQY3 521 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 DTX2Q86UW9 622 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 TMPRSS12Q86WS5 348 aa3.53□□□□□ -1.84
ATP6V1C1-204ENST00000518959 ZNF548Q8NEK5 533 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms