RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 FAM193BQ96PV7 902 aaPredicted RBP6.82□□□□□ -1.32
CCDC6-203ENST00000518638 RPS6KC1Q96S38 1066 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 MXRA8Q9BRK3 442 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 LZTS2Q9BRK4 669 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 NT5C3AQ9H0P0 336 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 SLKQ9H2G2 1235 aaPredicted RBP6.82□□□□□ -1.32
CCDC6-203ENST00000518638 NRDE2Q9H7Z3 1164 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 PSTPIP2Q9H939 334 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 TBC1D13Q9NVG8 400 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 ASH2LQ9UBL3 628 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 CDH7Q9ULB5 785 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 CNTNAP2Q9UHC6 1331 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 BAZ2BQ9UIF8 2168 aaKnown RBP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 FFAR3O14843 346 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 ASMTLO95671 621 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 FOSP01100 380 aaPredicted RBP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 FSHBP01225 129 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 HNRNPA1P09651 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 COL6A2P12110 1019 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 DARSP14868 501 aaKnown RBP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 MC3RP41968 323 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 GLUD2P49448 558 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 GYS2P54840 703 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 GPC5P78333 572 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 SIM2Q14190 667 aaPredicted RBP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 WTAPQ15007 396 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 N4BP2L1Q5TBK1 243 aaPredicted RBP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 C1orf228Q6PIY5 440 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 TPRG1Q6ZUI0 275 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 NIPA1Q7RTP0 329 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 FGD2Q7Z6J4 655 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 B3GNT8Q7Z7M8 397 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 TMEM173Q86WV6 379 aaPredicted RBP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 SMAP1Q8IYB5 467 aaPredicted RBP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 DNASE1L2Q92874 299 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 FBXW5Q969U6 566 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 CLUHP3Q96NS8 147 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 SORCS2Q96PQ0 1159 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 HERC2P3Q9BVR0 1158 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 GCOM2Q9BZD3 368 aaPredicted RBP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 UBN1Q9NPG3 1134 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 RALYQ9UKM9 306 aaKnown RBP6.81□□□□□ -1.32
CCDC6-203ENST00000518638 GREB1Q4ZG55 1949 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 CHD6Q8TD26 2715 aa6.81□□□□□ -1.32
CCDC6-203ENST00000518638 SALL3Q9BXA9 1300 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 TCRBV16S1A1N1A0A5B0 115 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 IFIT3O14879 490 aaKnown RBP6.8□□□□□ -1.32
CCDC6-203ENST00000518638 TEX28O15482 410 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 ZNF623O75123 536 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 RFPL2O75678 378 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 RFPL3O75679 317 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 POU2F2P09086 479 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 HOXA9P31269 272 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 SLC11A1P49279 550 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 GPC3P51654 580 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 CLCN3P51790 818 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 TROAPQ12815 778 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 TCEA2Q15560 299 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 CEP55Q53EZ4 464 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 EFCAB12Q6NXP0 572 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 ABHD15Q6UXT9 468 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 RTL10Q7L3V2 364 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 RALYLQ86SE5 291 aaKnown RBP6.8□□□□□ -1.32
CCDC6-203ENST00000518638 CCDC60Q8IWA6 550 aaPredicted RBP6.8□□□□□ -1.32
CCDC6-203ENST00000518638 ZC3H7AQ8IWR0 971 aaKnown RBP6.8□□□□□ -1.32
CCDC6-203ENST00000518638 TRIM48Q8IWZ4 208 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 ZNF707Q96C28 371 aaPredicted RBP6.8□□□□□ -1.32
CCDC6-203ENST00000518638 LOXL4Q96JB6 756 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 LY9Q9HBG7 655 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 AGO4Q9HCK5 861 aaKnown RBP6.8□□□□□ -1.32
CCDC6-203ENST00000518638 TBC1D22BQ9NU19 505 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 FNIP2Q9P278 1114 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 PCDHA6Q9UN73 950 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 NUB1Q9Y5A7 615 aa6.8□□□□□ -1.32
CCDC6-203ENST00000518638 SLC27A2O14975 620 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 GSTA4O15217 222 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 OFD1O75665 1012 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 CKMP06732 381 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 C8BP07358 591 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 PDGFRBP09619 1106 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 SRGAP2CP0DJJ0 459 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 PYGMP11217 842 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 LIMS1P48059 325 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 MASP1P48740 699 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 DNM2P50570 870 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 PDE1AP54750 535 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 SETQ01105 290 aaPredicted RBP6.79□□□□□ -1.32
CCDC6-203ENST00000518638 DSG1Q02413 1049 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 MTAPQ13126 283 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 LPAL2Q16609 132 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 SLC35G1Q2M3R5 365 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 LIN9Q5TKA1 542 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 SWSAP1Q6NVH7 229 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 TSSK4Q6SA08 328 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 LRSAM1Q6UWE0 723 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 PARM1Q6UWI2 310 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 ZNF410Q86VK4 478 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 LONP2Q86WA8 852 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 LINC01465Q8N7H1 131 aa6.79□□□□□ -1.32
CCDC6-203ENST00000518638 CNNM3Q8NE01 707 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms