RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SMN1Q16637 294 aaKnown RBP4.3□□□□□ -1.72
VPS13B-207ENST00000518569 PFKFB4Q16877 469 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 AASDHQ4L235 1098 aaPredicted RBP4.3□□□□□ -1.72
VPS13B-207ENST00000518569 FAM83BQ5T0W9 1011 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 FAM90A2PQ658T7 463 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 TTC30AQ86WT1 665 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 GATAD2AQ86YP4 633 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 TERB1Q8NA31 727 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 IPO4Q8TEX9 1081 aaKnown RBP4.3□□□□□ -1.72
VPS13B-207ENST00000518569 NELL1Q92832 810 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 REPS1Q96D71 796 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 DAZAP1Q96EP5 407 aaKnown RBP4.3□□□□□ -1.72
VPS13B-207ENST00000518569 SNX18Q96RF0 628 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 RIOX1Q9H6W3 641 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 OBP2BQ9NPH6 170 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 IL17RBQ9NRM6 502 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 TFCP2L1Q9NZI6 479 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 WNT6Q9Y6F9 365 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 LGALS16A8MUM7 142 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 TARM1B6A8C7 271 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 PCDH17O14917 1159 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 TCEA3O75764 348 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 C1QL1O75973 258 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 IGLV2-14P01704 120 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 CSTBP04080 98 aaKnown RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 ANXA6P08133 673 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 MMP8P22894 467 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 SERPINF1P36955 418 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 PBX1P40424 430 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 ALDH18A1P54886 795 aaKnown RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 CYP4F2P78329 520 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 TXNL4AP83876 142 aaKnown RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 CFHR3Q02985 330 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 GALNT1Q10472 559 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 CSHL1Q14406 222 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 PDCD2Q16342 344 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 RNASE12Q5GAN4 147 aaKnown RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 TRIM72Q6ZMU5 477 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 PRIMA1Q86XR5 153 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 NRSN1Q8IZ57 195 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 LINC01465Q8N7H1 131 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 C12orf76Q8N812 135 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 RMDN3Q96TC7 470 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 PRPF18Q99633 342 aaKnown RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 PAAF1Q9BRP4 392 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 CINPQ9BW66 212 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 TP63Q9H3D4 680 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-207ENST00000518569 ASB6Q9NWX5 421 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 COX11Q9Y6N1 276 aa4.29□□□□□ -1.72
VPS13B-207ENST00000518569 PNMA6EA0A0J9YXQ4 647 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 hCG_1642624A0A1W2PR95 340 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 GXYLT2A0PJZ3 443 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 BTBD19C9JJ37 291 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 H3BNC9 293 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 J3KTA2 159 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 EIF3JO75822 258 aaKnown RBP4.28□□□□□ -1.72
VPS13B-207ENST00000518569 PDE8BO95263 885 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 NUDT3O95989 172 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 BMP5P22003 454 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 FPR3P25089 353 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 NHLH1Q02575 133 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 DEUP1Q05D60 604 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 GRAMD1BQ3KR37 738 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 CCDC38Q502W7 563 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 TMEM196Q5HYL7 178 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 SUMO4Q6EEV6 95 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 GRHL2Q6ISB3 625 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 KIRREL2Q6UWL6 708 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 NAPRTQ6XQN6 538 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 BCDIN3DQ7Z5W3 292 aaKnown RBP4.28□□□□□ -1.72
VPS13B-207ENST00000518569 CACNA2D3Q8IZS8 1091 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 BOLLQ8N9W6 283 aaKnown RBP4.28□□□□□ -1.72
VPS13B-207ENST00000518569 WDR60Q8WVS4 1066 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 EDC3Q96F86 508 aaKnown RBP4.28□□□□□ -1.72
VPS13B-207ENST00000518569 KATNAL1Q9BW62 490 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 CIPCQ9C0C6 399 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 PRDM13Q9H4Q3 707 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 PTPRHQ9HD43 1115 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 NFU1Q9UMS0 254 aa4.28□□□□□ -1.72
VPS13B-207ENST00000518569 SPATA31A1Q5TZJ5 1347 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 AQP12BA6NM10 295 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 CTIFO43310 598 aaKnown RBP4.27□□□□□ -1.73
VPS13B-207ENST00000518569 TPD52L2O43399 206 aaKnown RBP4.27□□□□□ -1.73
VPS13B-207ENST00000518569 ASNA1O43681 348 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 TAF5LO75529 589 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 MT-CO3P00414 261 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 ITGA2BP08514 1039 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 APEHP13798 732 aaKnown RBP4.27□□□□□ -1.73
VPS13B-207ENST00000518569 ZNF37AP17032 561 aaPredicted RBP4.27□□□□□ -1.73
VPS13B-207ENST00000518569 GSTM5P46439 218 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 CCDC15Q0P6D6 951 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 SEMA3BQ13214 749 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 ELF2Q15723 593 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 TRIM60Q495X7 471 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 FCRLBQ6BAA4 426 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 TANGO2Q6ICL3 276 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 CCDC144NLQ6NUI1 221 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 ERAP2Q6P179 960 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms